Code Monkey home page Code Monkey logo

pylops-gpu's Introduction

PyLops-gpu

PyPI version Build Status AzureDevOps Status Documentation Status OS-support Slack Status

🚦 🚦 This library is unmantained! If interested in running PyLops on GPUs please use the cupy backend from the PyLops main library 🚦 🚦

Objective

This library is an extension of PyLops to run operators on GPUs.

As much as numpy and scipy lie at the core of the parent project PyLops, PyLops-GPU heavily builds on top of PyTorch and takes advantage of the same optimized tensor computations used in PyTorch for deep learning using GPUs and CPUs.

Doing so, linear operators can be computed on GPUs.

Here is a simple example showing how a diagonal operator can be created, applied and inverted using PyLops:

import numpy as np
from pylops import Diagonal

n = int(1e6)
x = np.ones(n)
d = np.arange(n) + 1.

Dop = Diagonal(d)

# y = Dx
y = Dop*x

and similarly using PyLops-gpu:

import numpy as np
import torch
from pylops_gpu.utils.backend import device
from pylops_gpu import Diagonal

dev = device()

n = int(1e6)
x = torch.ones(n, dtype=torch.float64).to(dev)
d = (torch.arange(0, n, dtype=torch.float64) + 1.).to(dev)

Dop = Diagonal(d, device=dev)

# y = Dx
y = Dop*x

Running these two snippets of code in Google Colab with GPU enabled gives a 50+ speed up for the forward pass.

As a by-product of implementing PyLops linear operators in PyTorch, we can easily chain our operators with any nonlinear mathematical operation (e.g., log, sin, tan, pow, ...) as well as with operators from the torch.nn submodule and obtain Automatic Differentiation (AD) for the entire chain. Since the gradient of a linear operator is simply its adjoint, we have implemented a single class, pylops_gpu.TorchOperator, which can wrap any linear operator from PyLops and PyLops-gpu libraries and return a torch.autograd.Function object.

Project structure

This repository is organized as follows:

  • pylops_gpu: python library containing various GPU-powered linear operators and auxiliary routines
  • pytests: set of pytests
  • testdata: sample datasets used in pytests and documentation
  • docs: sphinx documentation
  • examples: set of python script examples for each linear operator to be embedded in documentation using sphinx-gallery
  • tutorials: set of python script tutorials to be embedded in documentation using sphinx-gallery

Getting started

You need Python 3.5 or greater.

From PyPi

If you want to use PyLops-gpu within your codes, install it in your Python-gpu environment by typing the following command in your terminal:

pip install pylops-gpu

Open a python terminal and type:

import pylops_gpu

If you do not see any error, you should be good to go, enjoy!

Note: you may see an error if pytorch-complex-tensor has not been previously installed. In that case first run pip install pytorch-complex-tensor and then install pylops-gpu

From Github

You can also directly install from the master node

pip install git+https://[email protected]/PyLops/pylops-gpu.git@master

Contributing

Feel like contributing to the project? Adding new operators or tutorial?

Follow the instructions from PyLops official documentation.

Documentation

The official documentation of PyLops-gpu is available here.

Visit this page to get started learning about different operators and their applications as well as how to create new operators yourself and make it to the Contributors list.

Moreover, if you have installed PyLops using the developer environment you can also build the documentation locally by typing the following command:

make doc

Once the documentation is created, you can make any change to the source code and rebuild the documentation by simply typing

make docupdate

Note that if a new example or tutorial is created (and if any change is made to a previously available example or tutorial) you are required to rebuild the entire documentation before your changes will be visible.

History

PyLops-GPU was initially written and it is currently maintained by Equinor. It is an extension of PyLops for large-scale optimization with GPU-driven linear operators on that can be tailored to our needs, and as contribution to the free software community.

Contributors

  • Matteo Ravasi, mrava87
  • Francesco Picetti, fpicetti

Recommend Projects

  • React photo React

    A declarative, efficient, and flexible JavaScript library for building user interfaces.

  • Vue.js photo Vue.js

    🖖 Vue.js is a progressive, incrementally-adoptable JavaScript framework for building UI on the web.

  • Typescript photo Typescript

    TypeScript is a superset of JavaScript that compiles to clean JavaScript output.

  • TensorFlow photo TensorFlow

    An Open Source Machine Learning Framework for Everyone

  • Django photo Django

    The Web framework for perfectionists with deadlines.

  • D3 photo D3

    Bring data to life with SVG, Canvas and HTML. 📊📈🎉

Recommend Topics

  • javascript

    JavaScript (JS) is a lightweight interpreted programming language with first-class functions.

  • web

    Some thing interesting about web. New door for the world.

  • server

    A server is a program made to process requests and deliver data to clients.

  • Machine learning

    Machine learning is a way of modeling and interpreting data that allows a piece of software to respond intelligently.

  • Game

    Some thing interesting about game, make everyone happy.

Recommend Org

  • Facebook photo Facebook

    We are working to build community through open source technology. NB: members must have two-factor auth.

  • Microsoft photo Microsoft

    Open source projects and samples from Microsoft.

  • Google photo Google

    Google ❤️ Open Source for everyone.

  • D3 photo D3

    Data-Driven Documents codes.