Comments (3)
Hi Danilo Horta,
thank you very much vor adding Python 3 support that quickly. I am sorry, I was not aware that the limix package did not support Python 3 before. I am the application specialist of the HPC cluster of ETH Zurich and got a request from one of our users that asked me explicitly to install the package for Python 3.4.3.
Best regards and thank you again for adding Python 3 support.
Sam
from limix-backup.
Hi samfux84. Thank you for the feedback!
The trouble is that limix does not support Python 3 and you are running it with Python 3.4. A quick "fix" would be to run it on Python 2.7. I will have a look at the difficult to port it to Python 3 though.
Let me know how it goes. Thanks!
from limix-backup.
Hi samfux84. I just ported Limix to work on Python 3.4 as well. The Limix from the master branch should work in your environment (if not, please, let us know).
The proper release (on pypi, conda, and github) will have version 0.8.* and should be ready in 2 hours time.
from limix-backup.
Related Issues (18)
- Data into HDF5 format HOT 4
- Covariance Matrix Check HOT 3
- pip install fails: `no such option: --egg-base` HOT 3
- limix installation via anaconda/windows HOT 2
- cl: Command line error D8021: invalid numeric argument '/Wno-comment' errror: command 'C:\\User\\Administrator\\AppData\\Local\\Programs\\Common\\Microsoft\\Visual C++ for Python\\9.0\\VC\\Bin\\cl.exe' failed with exit status 2
- limix_converter problem with phenotype_sample.csv HOT 2
- limix_converter appends decimal point to sample_ID
- plot_manhattan bug
- snp_idx not defined in genotype_reader
- Inconsistencies for limix package on pypi HOT 2
- limix_converter problem1 & dataset.getPhenotypes problem2 HOT 1
- Please state minimal infrastructure conditions to install HOT 1
- limix won't install
- Deps not mentioned in docs HOT 2
- setup.py doens't honor standard python setup.py options HOT 4
- chromosome names not numeric HOT 1
- limix not appearing in pip freeze (with virtualenv) when built from source HOT 1
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