Comments (2)
Hey
How did you solve your problem....?
Thks
from stream.
Hey
How did you solve your problem....?
Thks
Did your script finish? are there any other files generated except for figures?
Can you also try to specify the number of cores for the steps that enable parallel computing?
e.g. st.select_variable_genes(adata,loess_frac=0.01,save_fig=True,n_jobs=2)
st.dimension_reduction(adata,,method='se',nb_pct=50.0/adata.obs.shape[0],n_components=10,n_jobs=2)
st.plot_dimension_reduction(adata,save_fig=True)
from stream.
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