photocyte Goto Github PK

orthofinder-miner

orthofinder_docker

osp

An Open-source Plate Reader

ot2-controller

A SiLA 2 complaint controller for an Opentrons OT-2 liquid handling robot.

paml

Protocol Activity Modeling Language

pasa_expression_filter_2017

photocyte.github.io

Personal website, built with hydejack

plateo

🤖 Python biolab automation library: parsers, reports generators, picklists simulators, and more

plot_mitochondrial_genome_with_circos

ppyr_ogs

Official Geneset (OGS) for Photinus pyralis, at least until I figure out a long term alternative

primer3_nf

A Nextflow wrapper for primer3

pymzml

pymzML - an interface between Python and mzML Mass spectrometry Files

recoll-webui_singularity

repeatmodeler2_nf

Nextflow workflow to easily run RepeatModeler with conda and singularity

scubat2

Scaffolding contigs with transcripts

shournal_singularity

subcellular_localization

summarize_directory_contents_to_html

A python program with outputs & opens an HTML table summarizing the files in a directory

tmsu_singularity

transxpress

transXpress: a Nextflow pipeline for rapid de novo transcriptome assembly and annotation

trinityrnaseq

Trinity RNA-Seq de novo transcriptome assembly

ucsc-ospo

xcalibur-sld

Reads Thermo SLD (sequence) files that contain the information about the sequence of mass spectrometry runs.