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afdb-dictionary

AlphaFold Protein Structure Database Dictionary

afdb-notebooks

api-webinars

Study materials for the PDBe API webinar series in September 2020.

arpeggio

Calculation of interatomic interactions in molecular structures

bio-hmm-logo

Bio::HMM::Logo - Build logo graphics from HMM files

ccdutils

A set of python tools to deal with PDB chemical components definitions for small molecules, taken from the wwPDB Chemical Component Dictionary, uses RDKit

consensus-colors

perl module for dealing with consensus colors in HMM logos

exp-pages

Angular2 and Polymer components to display experimental information for a PDB entry

heatmap-component

Canvas-based Interactive Heatmap Component

ligand-env

Public repository of the PDBe ligand environment component

litemol

A library/plugin for handling 3D structural molecular data (not only) in the browser.

ner_for_protein_structures

pdb-3d-complex

Summary web-component for the PDB 3D complex, a server that analyses the complexes in crystal structures

pdb-images

Generates images from mmCIF/BCIF files

pdb-links

pdb-lite-mol

Web-component implementation of LiteMol 3D structure viewer.

pdb-prints

pdb-raw-exp-data

Polymer component displaying related raw experimental data when available

pdb-redo

PDB_REDO

pdb-residue-interactions

Residue contacts viewer in Protein Contacts Atlas

pdb-rna-viewer

The PDB RNA viewer depicts the secondary structure of a RNA in a 2D representation

pdb-search-autocomplete

PDB Autocomplete Angular component

pdb-sequence-viewer

PDB Sequence-feature Viewer

pdb-topology-viewer

PDB Topology Viewer

pdb-uniprot-viewer

PDB UniProt Viewer

pdbe-aggregated-api-example

A Jupyter Notebook with an example use case for the PDBe Aggregated API

pdbe-api-specifications

pdbe-api-training

Interactive Python notebooks for PDBe API training

pdbe-autocomplete-search

Angular 2 PDBe Autocomplete Search Component - Beta

pdbe-notebooks