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Name: Pavel Sagulenko
Type: User
Company: Max-Planck Institute
Location: Tubingen, Germany
Name: Pavel Sagulenko
Type: User
Company: Max-Planck Institute
Location: Tubingen, Germany
FFPopSim is a collection of C++ classes and a Python interface for efficient simulation of large populations, in particular when the product of mutation rate and population size is larger than one. It consists of one library for individual-based simulations, and a complementary one for simulation of the entire genotype distribution. The latter is coded efficiently using Fast-Fourier Transforms to speed up recombination operations.
Maximum likelihood inference of time stamped phylogenies and ancestral reconstruction
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