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LaTeX Examples Document Source

Home Page: https://passlab.github.io/Examples/

License: Other

TeX 18.04% Makefile 0.16% C 7.39% Fortran 8.38% C++ 0.76% Shell 0.30% Perl 18.19% Python 0.94% Jupyter Notebook 45.84%

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examples's Issues

Code cells can not be highlighted in some of the notebooks

With language setting of "c", WARNING: Could not lex literal_block as "c". Highlighting skipped is triggered for some of the notebooks.

tex2notebook.py broke when upgrading to the latest OpenMP examples v5.2

The latest OpenMP Examples change some tex and source files structure, thus the original tex2notebook breaks. It need to fix for the new tex file and source file location.

Missing compilation flags in the source code

To execute the sample code in the Jupyter notebook correctly, we have to specify the flags accordingly. Otherwise, the complication may fail.

For example, if omp.h is included and omp_get_thread_num() is used, we need to insert //%cflags: -fopenmp in the code cell while converting the latex files.

Move tex2notebook to a separate folder

When Jupyter Book builds the notebook files, it will scan all files in /notebook folder. The irrelevant README and tex2notebook.py will cause warnings since they are not part of the book. We can move the tools to /util/tex2notebook folder and only keep the book-related files in /notebook.

Pin down python packages

It would be helpful to generate the requirements.txt using pip freeze, which would include the package numbers. Currently, I am trying to use 382e5282722af262d91a66661151c4ca204ae9d7 (because main is broken), and I'm seeing the following issue below. I think this issue is caused because of an incompatible version of nbformat, but I am not sure.

nbformat.validator.NotebookValidationError: None is not valid under any of the given schemas

Failed validating 'oneOf' in notebook['properties']['text']:

On instance['text']:
None

Incorrect level of headers in the generated jupyter book

For now \section{}, \subsection{} and \subsubsection{} are replaced by #, ## and ### for md headers respectively.
However, the headers are proved triggering warnings when generating jupyter book.
The detailed warnings are attached below.
This bug is caused by the contents construction of LaTeX files and the solid header arrangement rule of jupyter book.
Some sections are distributed into several files, that is, the first level header of a certain LaTeX file could be \subsection{} thus being replaced by ##.
Then, for jupyter book, it is not allowed, for the highest level header in a single page should always be #.

/Users/jkkl/Desktop/Examples/util/tex2notebook/tmp/contents/Examples_SIMD.ipynb:10003: WARNING: Non-consecutive header level increase; 0 to 2 [myst.header]
/Users/jkkl/Desktop/Examples/util/tex2notebook/tmp/contents/Examples_SIMD.ipynb:200002: WARNING: Non-consecutive header level increase; 0 to 2 [myst.header]
/Users/jkkl/Desktop/Examples/util/tex2notebook/tmp/contents/Examples_SIMD.ipynb:280002: WARNING: Non-consecutive header level increase; 0 to 2 [myst.header]
/Users/jkkl/Desktop/Examples/util/tex2notebook/tmp/contents/Examples_acquire_release.ipynb:10002: WARNING: Non-consecutive header level increase; 0 to 2 [myst.header]
/Users/jkkl/Desktop/Examples/util/tex2notebook/tmp/contents/Examples_affinity.ipynb:10002: WARNING: Non-consecutive header level increase; 0 to 2 [myst.header]
/Users/jkkl/Desktop/Examples/util/tex2notebook/tmp/contents/Examples_affinity_display.ipynb:10002: WARNING: Non-consecutive header level increase; 0 to 2 [myst.header]
/Users/jkkl/Desktop/Examples/util/tex2notebook/tmp/contents/Examples_affinity_query.ipynb:10002: WARNING: Non-consecutive header level increase; 0 to 2 [myst.header]
/Users/jkkl/Desktop/Examples/util/tex2notebook/tmp/contents/Examples_allocators.ipynb:10002: WARNING: Non-consecutive header level increase; 0 to 2 [myst.header]
/Users/jkkl/Desktop/Examples/util/tex2notebook/tmp/contents/Examples_array_sections.ipynb:10002: WARNING: Non-consecutive header level increase; 0 to 2 [myst.header]
/Users/jkkl/Desktop/Examples/util/tex2notebook/tmp/contents/Examples_array_shaping.ipynb:10002: WARNING: Non-consecutive header level increase; 0 to 2 [myst.header]

Warnings or possible errors while building the book

The latex files can be converted to Jupyter notebook files without problems. However, while building the Jupyter book, it shows warnings for some of the notebook files. They didn't cause building failure, but it leads to incorrect book content.
They are about incomplete _toc.yml and improper title/header structure. We may need to update tex2notebook.py to eliminate those warnings.

(pydev) [ouankou@nara notebook]$ jb build .
Running Jupyter-Book v0.10.1
Source Folder: /home/ouankou/Projects/Examples/notebook
Config Path: /home/ouankou/Projects/Examples/notebook/_config.yml
Output Path: /home/ouankou/Projects/Examples/notebook/_build/html
Running Sphinx v3.5.2
making output directory... done
myst v0.13.5: MdParserConfig(renderer='sphinx', commonmark_only=False, dmath_allow_labels=True, dmath_allow_space=True, dmath_allow_digits=True, update_mathjax=True, enable_extensions=['colon_fence', 'dollarmath', 'linkify', 'substitution'], disable_syntax=[], url_schemes=['mailto', 'http', 'https'], heading_anchors=None, html_meta=[], footnote_transition=True, substitutions=[], sub_delimiters=['{', '}'])
building [mo]: targets for 0 po files that are out of date
building [html]: targets for 107 source files that are out of date
updating environment: [new config] 107 added, 0 changed, 0 removed
reading sources... [100%] intro                                                                         
WARNING: Found a content page that is not in _toc.yml: README.md.
/home/ouankou/Projects/Examples/notebook/README.md:1: WARNING: Non-consecutive header level increase; 0 to 2 [myst.header]
/home/ouankou/Projects/Examples/notebook/contents/Chap_SIMD.ipynb:10002: WARNING: Non-consecutive header level increase; 0 to 2 [myst.header]
/home/ouankou/Projects/Examples/notebook/contents/Chap_affinity.ipynb:10002: WARNING: Non-consecutive header level increase; 0 to 2 [myst.header]
/home/ouankou/Projects/Examples/notebook/contents/Chap_data_environment.ipynb:10002: WARNING: Non-consecutive header level increase; 0 to 2 [myst.header]
/home/ouankou/Projects/Examples/notebook/contents/Chap_devices.ipynb:10002: WARNING: Non-consecutive header level increase; 0 to 2 [myst.header]
/home/ouankou/Projects/Examples/notebook/contents/Chap_memory_model.ipynb:10002: WARNING: Non-consecutive header level increase; 0 to 2 [myst.header]
/home/ouankou/Projects/Examples/notebook/contents/Chap_parallel_execution.ipynb:10002: WARNING: Non-consecutive header level increase; 0 to 2 [myst.header]
/home/ouankou/Projects/Examples/notebook/contents/Chap_program_control.ipynb:10002: WARNING: Non-consecutive header level increase; 0 to 2 [myst.header]
/home/ouankou/Projects/Examples/notebook/contents/Chap_synchronization.ipynb:10002: WARNING: Non-consecutive header level increase; 0 to 2 [myst.header]
/home/ouankou/Projects/Examples/notebook/contents/Chap_tasking.ipynb:10002: WARNING: Non-consecutive header level increase; 0 to 2 [myst.header]
/home/ouankou/Projects/Examples/notebook/contents/Examples_Chapt.ipynb:10002: WARNING: Non-consecutive header level increase; 0 to 2 [myst.header]
/home/ouankou/Projects/Examples/notebook/contents/Examples_SIMD.ipynb:10003: WARNING: Non-consecutive header level increase; 0 to 3 [myst.header]
/home/ouankou/Projects/Examples/notebook/contents/Examples_SIMD.ipynb:200002: WARNING: Non-consecutive header level increase; 0 to 3 [myst.header]
/home/ouankou/Projects/Examples/notebook/contents/Examples_SIMD.ipynb:280002: WARNING: Non-consecutive header level increase; 0 to 3 [myst.header]
/home/ouankou/Projects/Examples/notebook/contents/Examples_acquire_release.ipynb:10002: WARNING: Non-consecutive header level increase; 0 to 3 [myst.header]
/home/ouankou/Projects/Examples/notebook/contents/Examples_affinity.ipynb:10002: WARNING: Non-consecutive header level increase; 0 to 3 [myst.header]
/home/ouankou/Projects/Examples/notebook/contents/Examples_affinity_display.ipynb:10002: WARNING: Non-consecutive header level increase; 0 to 3 [myst.header]
/home/ouankou/Projects/Examples/notebook/contents/Examples_affinity_query.ipynb:10002: WARNING: Non-consecutive header level increase; 0 to 3 [myst.header]
/home/ouankou/Projects/Examples/notebook/contents/Examples_allocators.ipynb:10002: WARNING: Non-consecutive header level increase; 0 to 3 [myst.header]
/home/ouankou/Projects/Examples/notebook/contents/Examples_array_sections.ipynb:10002: WARNING: Non-consecutive header level increase; 0 to 3 [myst.header]
/home/ouankou/Projects/Examples/notebook/contents/Examples_array_shaping.ipynb:10002: WARNING: Non-consecutive header level increase; 0 to 3 [myst.header]
WARNING: Found a content page that is not in _toc.yml: contents/Examples_associate.ipynb.
/home/ouankou/Projects/Examples/notebook/contents/Examples_associate.ipynb:10002: WARNING: Non-consecutive header level increase; 0 to 3 [myst.header]
/home/ouankou/Projects/Examples/notebook/contents/Examples_async_target_depend.ipynb:10002: WARNING: Non-consecutive header level increase; 0 to 3 [myst.header]
/home/ouankou/Projects/Examples/notebook/contents/Examples_async_target_nowait.ipynb:10002: WARNING: Non-consecutive header level increase; 0 to 4 [myst.header]
/home/ouankou/Projects/Examples/notebook/contents/Examples_async_target_nowait_depend.ipynb:10002: WARNING: Non-consecutive header level increase; 0 to 4 [myst.header]
/home/ouankou/Projects/Examples/notebook/contents/Examples_async_target_with_tasks.ipynb:10002: WARNING: Non-consecutive header level increase; 0 to 4 [myst.header]
/home/ouankou/Projects/Examples/notebook/contents/Examples_atomic.ipynb:10002: WARNING: Non-consecutive header level increase; 0 to 3 [myst.header]
/home/ouankou/Projects/Examples/notebook/contents/Examples_atomic_restrict.ipynb:10002: WARNING: Non-consecutive header level increase; 0 to 3 [myst.header]
/home/ouankou/Projects/Examples/notebook/contents/Examples_barrier_regions.ipynb:10002: WARNING: Non-consecutive header level increase; 0 to 3 [myst.header]
/home/ouankou/Projects/Examples/notebook/contents/Examples_cancellation.ipynb:10002: WARNING: Non-consecutive header level increase; 0 to 3 [myst.header]
/home/ouankou/Projects/Examples/notebook/contents/Examples_carrays_fpriv.ipynb:10002: WARNING: Non-consecutive header level increase; 0 to 3 [myst.header]
/home/ouankou/Projects/Examples/notebook/contents/Examples_collapse.ipynb:10002: WARNING: Non-consecutive header level increase; 0 to 3 [myst.header]
/home/ouankou/Projects/Examples/notebook/contents/Examples_cond_comp.ipynb:10002: WARNING: Non-consecutive header level increase; 0 to 3 [myst.header]
/home/ouankou/Projects/Examples/notebook/contents/Examples_copyin.ipynb:10002: WARNING: Non-consecutive header level increase; 0 to 3 [myst.header]
/home/ouankou/Projects/Examples/notebook/contents/Examples_copyprivate.ipynb:10002: WARNING: Non-consecutive header level increase; 0 to 3 [myst.header]
/home/ouankou/Projects/Examples/notebook/contents/Examples_cpp_reference.ipynb:10002: WARNING: Non-consecutive header level increase; 0 to 3 [myst.header]
/home/ouankou/Projects/Examples/notebook/contents/Examples_critical.ipynb:10002: WARNING: Non-consecutive header level increase; 0 to 3 [myst.header]
/home/ouankou/Projects/Examples/notebook/contents/Examples_declare_target.ipynb:10002: WARNING: Non-consecutive header level increase; 0 to 3 [myst.header]
/home/ouankou/Projects/Examples/notebook/contents/Examples_default_none.ipynb:10002: WARNING: Non-consecutive header level increase; 0 to 3 [myst.header]
/home/ouankou/Projects/Examples/notebook/contents/Examples_depobj.ipynb:10002: WARNING: Non-consecutive header level increase; 0 to 3 [myst.header]
/home/ouankou/Projects/Examples/notebook/contents/Examples_device.ipynb:10002: WARNING: Non-consecutive header level increase; 0 to 3 [myst.header]
/home/ouankou/Projects/Examples/notebook/contents/Examples_doacross.ipynb:10002: WARNING: Non-consecutive header level increase; 0 to 3 [myst.header]
/home/ouankou/Projects/Examples/notebook/contents/Examples_flush_nolist.ipynb:10002: WARNING: Non-consecutive header level increase; 0 to 3 [myst.header]
/home/ouankou/Projects/Examples/notebook/contents/Examples_fort_do.ipynb:10002: WARNING: Non-consecutive header level increase; 0 to 3 [myst.header]
/home/ouankou/Projects/Examples/notebook/contents/Examples_fort_loopvar.ipynb:10002: WARNING: Non-consecutive header level increase; 0 to 3 [myst.header]
/home/ouankou/Projects/Examples/notebook/contents/Examples_fort_race.ipynb:10002: WARNING: Non-consecutive header level increase; 0 to 3 [myst.header]
/home/ouankou/Projects/Examples/notebook/contents/Examples_fort_sa_private.ipynb:10002: WARNING: Non-consecutive header level increase; 0 to 3 [myst.header]
/home/ouankou/Projects/Examples/notebook/contents/Examples_fort_sp_common.ipynb:10002: WARNING: Non-consecutive header level increase; 0 to 3 [myst.header]
/home/ouankou/Projects/Examples/notebook/contents/Examples_fpriv_sections.ipynb:10002: WARNING: Non-consecutive header level increase; 0 to 3 [myst.header]
/home/ouankou/Projects/Examples/notebook/contents/Examples_get_nthrs.ipynb:10002: WARNING: Non-consecutive header level increase; 0 to 3 [myst.header]
/home/ouankou/Projects/Examples/notebook/contents/Examples_host_teams.ipynb:10002: WARNING: Non-consecutive header level increase; 0 to 3 [myst.header]
/home/ouankou/Projects/Examples/notebook/contents/Examples_icv.ipynb:10002: WARNING: Non-consecutive header level increase; 0 to 3 [myst.header]
/home/ouankou/Projects/Examples/notebook/contents/Examples_init_lock.ipynb:10002: WARNING: Non-consecutive header level increase; 0 to 4 [myst.header]
/home/ouankou/Projects/Examples/notebook/contents/Examples_init_lock_with_hint.ipynb:10003: WARNING: Non-consecutive header level increase; 0 to 4 [myst.header]
/home/ouankou/Projects/Examples/notebook/contents/Examples_lastprivate.ipynb:10002: WARNING: Non-consecutive header level increase; 0 to 3 [myst.header]
/home/ouankou/Projects/Examples/notebook/contents/Examples_linear_in_loop.ipynb:10002: WARNING: Non-consecutive header level increase; 0 to 3 [myst.header]
/home/ouankou/Projects/Examples/notebook/contents/Examples_linear_modifier.ipynb:10002: WARNING: Non-consecutive header level increase; 0 to 3 [myst.header]
/home/ouankou/Projects/Examples/notebook/contents/Examples_lock_owner.ipynb:10002: WARNING: Non-consecutive header level increase; 0 to 4 [myst.header]
/home/ouankou/Projects/Examples/notebook/contents/Examples_locks.ipynb:10002: WARNING: Non-consecutive header level increase; 0 to 3 [myst.header]
/home/ouankou/Projects/Examples/notebook/contents/Examples_loop.ipynb:10002: WARNING: Non-consecutive header level increase; 0 to 3 [myst.header]
/home/ouankou/Projects/Examples/notebook/contents/Examples_master.ipynb:10002: WARNING: Non-consecutive header level increase; 0 to 3 [myst.header]
/home/ouankou/Projects/Examples/notebook/contents/Examples_mem_model.ipynb:10002: WARNING: Non-consecutive header level increase; 0 to 3 [myst.header]
/home/ouankou/Projects/Examples/notebook/contents/Examples_metadirective.ipynb:10002: WARNING: Non-consecutive header level increase; 0 to 3 [myst.header]
/home/ouankou/Projects/Examples/notebook/contents/Examples_nestable_lock.ipynb:10002: WARNING: Non-consecutive header level increase; 0 to 4 [myst.header]
/home/ouankou/Projects/Examples/notebook/contents/Examples_nested_loop.ipynb:10002: WARNING: Non-consecutive header level increase; 0 to 3 [myst.header]
/home/ouankou/Projects/Examples/notebook/contents/Examples_nesting_restrict.ipynb:10002: WARNING: Non-consecutive header level increase; 0 to 3 [myst.header]
/home/ouankou/Projects/Examples/notebook/contents/Examples_nowait.ipynb:10002: WARNING: Non-consecutive header level increase; 0 to 3 [myst.header]
/home/ouankou/Projects/Examples/notebook/contents/Examples_nthrs_dynamic.ipynb:10002: WARNING: Non-consecutive header level increase; 0 to 3 [myst.header]
/home/ouankou/Projects/Examples/notebook/contents/Examples_nthrs_nesting.ipynb:10002: WARNING: Non-consecutive header level increase; 0 to 3 [myst.header]
/home/ouankou/Projects/Examples/notebook/contents/Examples_ordered.ipynb:10002: WARNING: Non-consecutive header level increase; 0 to 3 [myst.header]
/home/ouankou/Projects/Examples/notebook/contents/Examples_parallel.ipynb:10002: WARNING: Non-consecutive header level increase; 0 to 3 [myst.header]
/home/ouankou/Projects/Examples/notebook/contents/Examples_parallel_master_taskloop.ipynb:10002: WARNING: Non-consecutive header level increase; 0 to 3 [myst.header]
/home/ouankou/Projects/Examples/notebook/contents/Examples_ploop.ipynb:10002: WARNING: Non-consecutive header level increase; 0 to 3 [myst.header]
/home/ouankou/Projects/Examples/notebook/contents/Examples_pra_iterator.ipynb:10002: WARNING: Non-consecutive header level increase; 0 to 3 [myst.header]
/home/ouankou/Projects/Examples/notebook/contents/Examples_private.ipynb:10002: WARNING: Non-consecutive header level increase; 0 to 3 [myst.header]
/home/ouankou/Projects/Examples/notebook/contents/Examples_psections.ipynb:10002: WARNING: Non-consecutive header level increase; 0 to 3 [myst.header]
/home/ouankou/Projects/Examples/notebook/contents/Examples_reduction.ipynb:10002: WARNING: Non-consecutive header level increase; 0 to 3 [myst.header]
/home/ouankou/Projects/Examples/notebook/contents/Examples_requires.ipynb:10002: WARNING: Non-consecutive header level increase; 0 to 3 [myst.header]
/home/ouankou/Projects/Examples/notebook/contents/Examples_scan.ipynb:10002: WARNING: Non-consecutive header level increase; 0 to 3 [myst.header]
/home/ouankou/Projects/Examples/notebook/contents/Examples_set_dynamic_nthrs.ipynb:10002: WARNING: Non-consecutive header level increase; 0 to 3 [myst.header]
/home/ouankou/Projects/Examples/notebook/contents/Examples_simple_lock.ipynb:10002: WARNING: Non-consecutive header level increase; 0 to 4 [myst.header]
/home/ouankou/Projects/Examples/notebook/contents/Examples_single.ipynb:10002: WARNING: Non-consecutive header level increase; 0 to 3 [myst.header]
/home/ouankou/Projects/Examples/notebook/contents/Examples_target.ipynb:10002: WARNING: Non-consecutive header level increase; 0 to 3 [myst.header]
/home/ouankou/Projects/Examples/notebook/contents/Examples_target_data.ipynb:10002: WARNING: Non-consecutive header level increase; 0 to 3 [myst.header]
/home/ouankou/Projects/Examples/notebook/contents/Examples_target_defaultmap.ipynb:10002: WARNING: Non-consecutive header level increase; 0 to 3 [myst.header]
/home/ouankou/Projects/Examples/notebook/contents/Examples_target_mapper.ipynb:10002: WARNING: Non-consecutive header level increase; 0 to 3 [myst.header]
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/home/ouankou/Projects/Examples/notebook/contents/Examples_target_pointer_mapping.ipynb:10002: WARNING: Non-consecutive header level increase; 0 to 3 [myst.header]
/home/ouankou/Projects/Examples/notebook/contents/Examples_target_structure_mapping.ipynb:10002: WARNING: Non-consecutive header level increase; 0 to 3 [myst.header]
/home/ouankou/Projects/Examples/notebook/contents/Examples_target_unstructured_data.ipynb:20002: WARNING: Non-consecutive header level increase; 0 to 3 [myst.header]
/home/ouankou/Projects/Examples/notebook/contents/Examples_target_unstructured_data.ipynb:30003: WARNING: Non-consecutive header level increase; 0 to 3 [myst.header]
/home/ouankou/Projects/Examples/notebook/contents/Examples_target_update.ipynb:10002: WARNING: Non-consecutive header level increase; 0 to 3 [myst.header]
/home/ouankou/Projects/Examples/notebook/contents/Examples_task_affinity.ipynb:10002: WARNING: Non-consecutive header level increase; 0 to 3 [myst.header]
/home/ouankou/Projects/Examples/notebook/contents/Examples_task_dep.ipynb:10002: WARNING: Non-consecutive header level increase; 0 to 3 [myst.header]
/home/ouankou/Projects/Examples/notebook/contents/Examples_task_priority.ipynb:10002: WARNING: Non-consecutive header level increase; 0 to 3 [myst.header]
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/home/ouankou/Projects/Examples/notebook/contents/Examples_taskyield.ipynb:10002: WARNING: Non-consecutive header level increase; 0 to 3 [myst.header]
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/home/ouankou/Projects/Examples/notebook/contents/Examples_workshare.ipynb:10002: WARNING: Non-consecutive header level increase; 0 to 3 [myst.header]
/home/ouankou/Projects/Examples/notebook/contents/Examples_worksharing_critical.ipynb:10002: WARNING: Non-consecutive header level increase; 0 to 3 [myst.header]
/home/ouankou/Projects/Examples/notebook/contents/Foreword_Chapt.ipynb:10002: WARNING: Non-consecutive header level increase; 0 to 2 [myst.header]
/home/ouankou/Projects/Examples/notebook/contents/History.ipynb:10002: WARNING: Non-consecutive header level increase; 0 to 2 [myst.header]
/home/ouankou/Projects/Examples/notebook/contents/Introduction_Chapt.ipynb:20002: WARNING: Non-consecutive header level increase; 0 to 2 [myst.header]
/home/ouankou/Projects/Examples/notebook/intro.md:11: WARNING: toctree contains reference to nonexisting document 'contents/Title_Page'
looking for now-outdated files... none found
pickling environment... done
checking consistency... /home/ouankou/Projects/Examples/notebook/README.md: WARNING: document isn't included in any toctree
/home/ouankou/Projects/Examples/notebook/contents/Examples_associate.ipynb: WARNING: document isn't included in any toctree
done
preparing documents... done
writing output... [100%] intro                                                                          
/home/ouankou/Projects/Examples/notebook/contents/Chap_program_control.ipynb:180003: WARNING: toctree contains reference to document 'contents/Examples_standalone' that doesn't have a title: no link will be generated
/home/ouankou/Projects/Examples/notebook/contents/Chap_program_control.ipynb:180003: WARNING: toctree contains reference to document 'contents/Examples_standalone' that doesn't have a title: no link will be generated
/home/ouankou/Projects/Examples/notebook/contents/Chap_program_control.ipynb:180003: WARNING: toctree contains reference to document 'contents/Examples_standalone' that doesn't have a title: no link will be generated
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/home/ouankou/Projects/Examples/notebook/contents/Examples_collapse.ipynb:: WARNING: Could not lex literal_block as "c". Highlighting skipped.
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/home/ouankou/Projects/Examples/notebook/contents/Examples_fort_loopvar.ipynb:: WARNING: Could not lex literal_block as "c". Highlighting skipped.
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/home/ouankou/Projects/Examples/notebook/contents/Examples_host_teams.ipynb:: WARNING: Could not lex literal_block as "c". Highlighting skipped.
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/home/ouankou/Projects/Examples/notebook/contents/Examples_linear_modifier.ipynb:: WARNING: Could not lex literal_block as "c". Highlighting skipped.
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/home/ouankou/Projects/Examples/notebook/contents/Chap_program_control.ipynb:180003: WARNING: toctree contains reference to document 'contents/Examples_standalone' that doesn't have a title: no link will be generated
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/home/ouankou/Projects/Examples/notebook/contents/Chap_program_control.ipynb:180003: WARNING: toctree contains reference to document 'contents/Examples_standalone' that doesn't have a title: no link will be generated
/home/ouankou/Projects/Examples/notebook/contents/Examples_reduction.ipynb:: WARNING: Could not lex literal_block as "c". Highlighting skipped.
/home/ouankou/Projects/Examples/notebook/contents/Chap_program_control.ipynb:180003: WARNING: toctree contains reference to document 'contents/Examples_standalone' that doesn't have a title: no link will be generated
/home/ouankou/Projects/Examples/notebook/contents/Examples_requires.ipynb:: WARNING: Could not lex literal_block as "c". Highlighting skipped.
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/home/ouankou/Projects/Examples/notebook/contents/Examples_scan.ipynb:: WARNING: Could not lex literal_block as "c". Highlighting skipped.
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/home/ouankou/Projects/Examples/notebook/contents/Chap_program_control.ipynb:180003: WARNING: toctree contains reference to document 'contents/Examples_standalone' that doesn't have a title: no link will be generated
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/home/ouankou/Projects/Examples/notebook/contents/Examples_simple_lock.ipynb:: WARNING: Could not lex literal_block as "c". Highlighting skipped.
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/home/ouankou/Projects/Examples/notebook/contents/Examples_target.ipynb:: WARNING: Could not lex literal_block as "c". Highlighting skipped.
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/home/ouankou/Projects/Examples/notebook/contents/Chap_program_control.ipynb:180003: WARNING: toctree contains reference to document 'contents/Examples_standalone' that doesn't have a title: no link will be generated
/home/ouankou/Projects/Examples/notebook/contents/Chap_program_control.ipynb:180003: WARNING: toctree contains reference to document 'contents/Examples_standalone' that doesn't have a title: no link will be generated
/home/ouankou/Projects/Examples/notebook/contents/Chap_program_control.ipynb:180003: WARNING: toctree contains reference to document 'contents/Examples_standalone' that doesn't have a title: no link will be generated
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/home/ouankou/Projects/Examples/notebook/contents/Chap_program_control.ipynb:180003: WARNING: toctree contains reference to document 'contents/Examples_standalone' that doesn't have a title: no link will be generated
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/home/ouankou/Projects/Examples/notebook/contents/Chap_program_control.ipynb:180003: WARNING: toctree contains reference to document 'contents/Examples_standalone' that doesn't have a title: no link will be generated
/home/ouankou/Projects/Examples/notebook/contents/Chap_program_control.ipynb:180003: WARNING: toctree contains reference to document 'contents/Examples_standalone' that doesn't have a title: no link will be generated
/home/ouankou/Projects/Examples/notebook/contents/Chap_program_control.ipynb:180003: WARNING: toctree contains reference to document 'contents/Examples_standalone' that doesn't have a title: no link will be generated
/home/ouankou/Projects/Examples/notebook/contents/Examples_tasking.ipynb:: WARNING: Could not lex literal_block as "c". Highlighting skipped.
/home/ouankou/Projects/Examples/notebook/contents/Examples_tasking.ipynb:: WARNING: Could not lex literal_block as "c". Highlighting skipped.
/home/ouankou/Projects/Examples/notebook/contents/Chap_program_control.ipynb:180003: WARNING: toctree contains reference to document 'contents/Examples_standalone' that doesn't have a title: no link will be generated
/home/ouankou/Projects/Examples/notebook/contents/Examples_taskloop.ipynb:: WARNING: Could not lex literal_block as "c". Highlighting skipped.
/home/ouankou/Projects/Examples/notebook/contents/Chap_program_control.ipynb:180003: WARNING: toctree contains reference to document 'contents/Examples_standalone' that doesn't have a title: no link will be generated
/home/ouankou/Projects/Examples/notebook/contents/Chap_program_control.ipynb:180003: WARNING: toctree contains reference to document 'contents/Examples_standalone' that doesn't have a title: no link will be generated
/home/ouankou/Projects/Examples/notebook/contents/Chap_program_control.ipynb:180003: WARNING: toctree contains reference to document 'contents/Examples_standalone' that doesn't have a title: no link will be generated
/home/ouankou/Projects/Examples/notebook/contents/Examples_threadprivate.ipynb:: WARNING: Could not lex literal_block as "c". Highlighting skipped.
/home/ouankou/Projects/Examples/notebook/contents/Chap_program_control.ipynb:180003: WARNING: toctree contains reference to document 'contents/Examples_standalone' that doesn't have a title: no link will be generated
/home/ouankou/Projects/Examples/notebook/contents/Examples_udr.ipynb:: WARNING: Could not lex literal_block as "c". Highlighting skipped.
/home/ouankou/Projects/Examples/notebook/contents/Chap_program_control.ipynb:180003: WARNING: toctree contains reference to document 'contents/Examples_standalone' that doesn't have a title: no link will be generated
/home/ouankou/Projects/Examples/notebook/contents/Examples_variant.ipynb:: WARNING: Could not lex literal_block as "c". Highlighting skipped.
/home/ouankou/Projects/Examples/notebook/contents/Chap_program_control.ipynb:180003: WARNING: toctree contains reference to document 'contents/Examples_standalone' that doesn't have a title: no link will be generated
/home/ouankou/Projects/Examples/notebook/contents/Chap_program_control.ipynb:180003: WARNING: toctree contains reference to document 'contents/Examples_standalone' that doesn't have a title: no link will be generated
/home/ouankou/Projects/Examples/notebook/contents/Chap_program_control.ipynb:180003: WARNING: toctree contains reference to document 'contents/Examples_standalone' that doesn't have a title: no link will be generated
/home/ouankou/Projects/Examples/notebook/contents/Chap_program_control.ipynb:180003: WARNING: toctree contains reference to document 'contents/Examples_standalone' that doesn't have a title: no link will be generated
/home/ouankou/Projects/Examples/notebook/contents/Chap_program_control.ipynb:180003: WARNING: toctree contains reference to document 'contents/Examples_standalone' that doesn't have a title: no link will be generated
/home/ouankou/Projects/Examples/notebook/contents/Chap_program_control.ipynb:180003: WARNING: toctree contains reference to document 'contents/Examples_standalone' that doesn't have a title: no link will be generated
/home/ouankou/Projects/Examples/notebook/contents/Chap_program_control.ipynb:180003: WARNING: toctree contains reference to document 'contents/Examples_standalone' that doesn't have a title: no link will be generated
generating indices... genindex /home/ouankou/Projects/Examples/notebook/contents/Chap_program_control.ipynb:180003: WARNING: toctree contains reference to document 'contents/Examples_standalone' that doesn't have a title: no link will be generated
done
writing additional pages... search /home/ouankou/Projects/Examples/notebook/contents/Chap_program_control.ipynb:180003: WARNING: toctree contains reference to document 'contents/Examples_standalone' that doesn't have a title: no link will be generated
done
copying static files... done
copying extra files... done
dumping search index in English (code: en)... done
dumping object inventory... done
build succeeded, 246 warnings.

The HTML pages are in _build/html.

===============================================================================

Finished generating HTML for book.
Your book's HTML pages are here:
    _build/html/
You can look at your book by opening this file in a browser:
    _build/html/index.html
Or paste this line directly into your browser bar:
    file:///home/ouankou/Projects/Examples/notebook/_build/html/index.html            

===============================================================================

Incorrect conversion in the Jupyter Notebook

The pink omp 5.0:
https://passlab.github.io/Examples/contents/Foreword_Chapt.html

The last paragraph in pink:
https://passlab.github.io/Examples/contents/Examples_Chapt.html

The input and ouput parameters of tex2notebook are not working

While in the root of the repository, running tex2notebook.py with specified input and output parameters failed.

# enter Examples root folder, in my case: /home/ouankou/Projects/Examples
python util/tex2notebook/tex2notebook.py -i . -o ./notebook

I expected the LaTex files will be converted to Jupyter notebooks in the notebook folder, but the following error is shown and nothing is produced.

Traceback (most recent call last):
  File "/home/ouankou/Projects/Examples/util/tex2notebook/tex2notebook.py", line 657, in <module>
    os.remove(contents_folder + "Title_Page.ipynb")

Enter Examples/util/tex2notebook first and then executing the Python script without any parameters works.

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