github update 4 days ago of TransPi.nf about transpi HOT 1 OPEN

Hello @dbajpp0,

Yes, now TransPi will work differently for the creation of the environments. Before TransPi was creating a single environment for the entire pipeline. However, this was causing issues when updating a package or adding a new program. Thus, now each process will build a separate conda environment. This guarantees that no matter what program I add in the future or what version I used, this will not break the entire pipeline. Yes, this will create multiple environments but all of them are in the same directory. Once you are finished with the analysis the conda directory can be deleted. The directory is called condaEnv and is located in the directory where you are running TransPi. To save space just erase the old TransPi conda using conda env remove -n TransPi and then clean the packages downloaded with this directory using conda clean --all. Let me know if you have further questions.

Best,
Ramón

from transpi.