oicr-gsi Goto Github PK
Name: Genome Sequence Informatics
Type: Organization
Bio: Repositories for OICR's Genome Sequence Informatics team
Location: Toronto, ON
Name: Genome Sequence Informatics
Type: Organization
Bio: Repositories for OICR's Genome Sequence Informatics team
Location: Toronto, ON
Check and inject fastq files
Workflow to run picard InsertSizeMetrics
Interface and tracking for clinical report generation
MAVIS workflow, annotation of structural variants
MEDIPS - MEthylated DNA ImmunoPrecipitation Sequencing analysis
Scripts for cfMeDIP QC analysis
Moved to https://miso-lims.github.io/walkthroughs
MISO: An open-source LIMS for NGS sequencing centres, now with detailed samples
Docker container for miso-lims
MiXCr identifies reads for V, D, J segment genes and quantifies antibody diversity
MMRDetect is a mutational signature-based classifier for identifying tumors with mismatch repair deficiency using whole-genome sequencing data.
A t-SNE framework to visualize OMICs data
Prometheus base tools for building other projects
workflow to detect Minimal Residual disease with MRDetect
msisensor-pro workflow
Aggregate results from bioinformatics analyses across many samples into a single report.
a WDL implementation of mutagene signature detection
Workflow for Mutect1 somatic variant calling
Workflow to run Mutect2 (GATK4)
QC tracking for files via a web service
Structural variant filtering and anlaysis of Nanopore human WGS data.
Workflow for nanopore coverage analysis, wdl wrapper for snakemake workflow forked from Simpson Lab repo.
Workflow for filter nanopore fastq file, wdl wrapper for snakemake workflow forked from Simpson Lab repo.
Workflow for nanopore reads mapping, wdl wrapper for snakemake workflow forked from Simpson Lab repo.
Workflow for running structural variants analysis, wdl wrapper for snakemake workflow forked from Simpson Lab repo.
A declarative, efficient, and flexible JavaScript library for building user interfaces.
🖖 Vue.js is a progressive, incrementally-adoptable JavaScript framework for building UI on the web.
TypeScript is a superset of JavaScript that compiles to clean JavaScript output.
An Open Source Machine Learning Framework for Everyone
The Web framework for perfectionists with deadlines.
A PHP framework for web artisans
Bring data to life with SVG, Canvas and HTML. 📊📈🎉
JavaScript (JS) is a lightweight interpreted programming language with first-class functions.
Some thing interesting about web. New door for the world.
A server is a program made to process requests and deliver data to clients.
Machine learning is a way of modeling and interpreting data that allows a piece of software to respond intelligently.
Some thing interesting about visualization, use data art
Some thing interesting about game, make everyone happy.
We are working to build community through open source technology. NB: members must have two-factor auth.
Open source projects and samples from Microsoft.
Google ❤️ Open Source for everyone.
Alibaba Open Source for everyone
Data-Driven Documents codes.
China tencent open source team.