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Oscar Davalos's Projects

scsplit icon scsplit

Genotype-free demultiplexing of pooled single-cell RNA-Seq, using a hidden state model for identifying genetically distinct samples within a mixed population.

softadapt icon softadapt

Implementation of the SoftAdapt paper (techniques for adaptive loss balancing of multi-tasking neural networks)

trvae-pytorch icon trvae-pytorch

remake of trvaep due to original having possible circular import

turbogliph icon turbogliph

R implementation of GLIPH (Grouping of Lymphocyte Interactions by Paratope Hotspots), an algorithm developed by Glanville et al to identify specificity groups in the T cell receptor repertoire based on local (motif sharing) and global (hamming distance) similarities.

tutorials icon tutorials

This Repository will host basic Tutorial for getting started with SingleCell Analysis in Python

web_scraper icon web_scraper

Web scraper for fun and also to make downloading papers I need to read much faster.

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