Comments (5)
moold
commented on May 26, 2024
Nope, it should be very quickly.
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chenji333
commented on May 26, 2024
So far, this interface has remained. May I ask which part is the problem?
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moold
commented on May 26, 2024
What is your system and gcc version?
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chenji333
commented on May 26, 2024
1：Linux version 3.10.0-327.el7.x86_64 ([email protected]) (gcc version 4.8.3 20140911 (Red Hat 4.8.3-9) (GCC) ) #1 SMP Thu Nov 19 22:10:57 UTC 2015
2：gcc version 4.8.5 20150623 (Red Hat 4.8.5-36) (GCC)
Is it possibly related to my version of gcc?
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moold
commented on May 26, 2024
Could you try to remove the option -Wall -O3 -fvisibility=hidden -s in util/Makefile, and make again?
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Related Issues (20)
- Reduction in genome size after polishing HOT 3
- how to deal with "N" HOT 1
- Polish with raw or corrected ONT reads? HOT 1
- NextPolish slurmstepd: error: JOB CANCELLED DUE TO TIME LIMIT HOT 6
- Using Illumina Hi-C and Chicago data? HOT 4
- How to use Nextpolish on NextDenovo draft assembly HOT 2
- Need information related to example given in NextPolish Software under the folder test_data HOT 4
- MissAssembly Correction using NextPolish (Need Suggestions) HOT 1
- nextpolish2.py never stop HOT 6
- Adding Hisat2 instead of BWA HOT 1
- error of generate_lqseqs_from_cluster HOT 3
- repeat regions HOT 5
- Empty bin directory after installation? HOT 2
- User defined alignment pipeline for short- and long-reads HOT 2
- [question] combine with medaka or not? HOT 3
- Polish only INDELs or only SNPs, and polishing thresholds HOT 1
- NextPolish license and distribution of source code HOT 1
- ImportError HOT 4
- gap filling effects? HOT 2
- Why there is no stats about changes when polished with nextpolish1.py or nextpolish2.py HOT 1
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