neuronal_synchrony_replication's People
neuronal_synchrony_replication's Issues
Rename neurons after
in nest.ipynb
alpha (first outer), beta (second outer), gamma (middle)
Collect all nest cases in one file
The nest simulations look pretty much the same except for the interpopulational connections. So they could be merged into one file.
Plot experiments
Random initialization
Currently the neuron populations start within the same phase. They should start in random phases.
Plot Spikes with Neuron IDs
Create plot A of Fig. 5
Delays in populations
In nest.ipynb the connections only have the default delay yet.
Configure poissonian noise properly
S15 and the corresponding text passage introduce some variables and values which are not yet realized in our implementation.
Texteinbettung
Check if all scenarios of the first experiment are implemented
Maybe the part about varying axonal delays is not specific enough.
FirstExp implement all cases
Serialize experiment results
- V_m
- Spike times
- config
Cleanup
Clean up code and write comments
Configurability
Make all parameters configurable in the config block.
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