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hpc-utils's Introduction

hpc-utils

A repository that contains helper function for using queue based cluster compute systems

Deploying on Cluster (Development)

Set Up App

  1. First ssh into the desired cluster (see #3 and #4).
  2. Clone the latest version of hpc-utils
  3. Create a new venv and run pip install -e . from the hpc-utils directory
  4. You should now be able to run the api and worker using hpcutils-api and hpcutils-worker respectively

Sert Up Environment for Jobs

  1. From the app, create a project
  2. From the terminal, run source hpc-utils/hpcutils/helpers/{cluster}.sh
  3. Create the virtual environment associated with your project using prepare_virtual_env {venv_path} {github_user} {github_repo} (alternatively if your project does not use a setup.py you can create your environment manually, but first make sure to run get_gpu_modules)
  4. Move venv to project location, cp -r {venv_path} {cluster_dir}/job_metadata/{project_name}/venv
  5. Now you should be able to run jobs fine and dandy

Deploying on Cluster (Production)

nohup (to be updated)

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