Python pipeline for neuroimaging data. Draft documentation at https://clpipe.readthedocs.io/en/latest/index.html

This pipeline is under development, and should not be used quite yet. If you are interested in contributing, please get in contact with Teague Henry ([email protected])

1. Open a Longleaf terminal session
2. Switch to python 3.6.6 using module add python/3.6.6
3. Install clpipe from GitHub with pip3 install --user --upgrade git+git://github.com/CohenLabUNC/clpipe.git

All necessary dependencies should install to your local Python library, and the console commands should be immediately useable.