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This is the development home of the workflow management system Snakemake. For general information, see

Home Page: https://snakemake.readthedocs.io

License: MIT License

Shell 0.07% Dockerfile 0.05% Python 36.29% Vim Script 0.14% CSS 0.07% Roff 0.01% Rebol 0.01% R 0.02% Makefile 0.01% Julia 0.01% HTML 62.44% Jupyter Notebook 0.03% JavaScript 0.01% Jinja 0.88%

snakemake's Introduction

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Snakemake

The Snakemake workflow management system is a tool to create reproducible and scalable data analyses. Snakemake is highly popular, with on average more than 6 new citations per week, and over 200k downloads. Workflows are described via a human readable, Python based language. They can be seamlessly scaled to server, cluster, grid and cloud environments without the need to modify the workflow definition. Finally, Snakemake workflows can entail a description of required software, which will be automatically deployed to any execution environment.

Homepage: https://snakemake.github.io

Copyright (c) 2012-2021 Johannes Köster [email protected] (see LICENSE)

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