musketeer-d Goto Github PK

micro8

Gitbook

msfs_teo

mSFS using a teosinte natural population

multiqc

Aggregate results from bioinformatics analyses across many samples into a single report.

nanopolish

Signal-level algorithms for MinION data

nanopore-methylation-utilities

ncovmemory

2020新冠肺炎记忆：报道、非虚构与个人叙述（持续更新） Memory of 2020 nCov: Media Coverage, Non-fiction Writings, and Individual Narratives (Continuously updating)

notebooks

路漫漫其修远兮

oneliners

Useful bash one-liners for bioinformatics.

princess

pseudoref

Make Pseudo-Reference Genome from VCF/BCF

pycometh

DNA methylation analysis downstream to Nanopolish for Oxford Nanopore DNA sequencing datasets

pyda-2e-zh

:book: [译] 利用 Python 进行数据分析 · 第 2 版

r_for_data_science

Materials for teaching R and tidyverse

releases

rerio

Research release basecalling models and configurations

sam

SAM (Significance Analysis of Microarrays) shiny app

seqtk

Toolkit for processing sequences in FASTA/Q formats

sniffles

Structural variation caller using third generation sequencing

snpsplit

Allele-specific alignment sorting

t2t-epigenetics

Repository for analysis scripts for the T2T Epigenetics manuscript

t2t_encode_analysis

Scripts for recapitulating the Encode reanalysis using the T2T chm13 reference assembly

tombo

Tombo is a suite of tools primarily for the identification of modified nucleotides from raw nanopore sequencing data.

viewbs

ViewBS - a powerful toolkit for visualization of high-throughput bisulfite sequencing data

wheathomoeologexpression