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cs-video-courses

List of Computer Science courses with video lectures.

data-science-sequencing.github.io

Web site for the class EE 372 : Data Science for High-Throughput Sequencing at Stanford

data-vis

Data Visualization

dbdp

Start here!

deep_learning_in_proteomics

A list of tools on proteomics using deep learning

differentialexpression_tuturial

digital_health_data_repository

The DHDR (Digital Health Data Repository) is a repository with sample data for use with the DBDP.

digitalbiomarkerdiscoverypipeline.github.io

Check out our website at dbdp.org! It is hosted here on GitHub pages.

distiller-nf

A modular Hi-C mapping pipeline

dsc80-2021-fa

Published course materials for DSC 80 in Fall 2021.

em-seq

Tools and Data related to Enzymatic Methylation Sequencing

epiclocks_cancer

This code relates to the project titled "Assessing the causal role of epigenetic clocks in the development of multiple cancers: a Mendelian randomization study"

epirhandbook_eng

The repository for the English version of the Epidemiologist R Handbook

etc3550slides

Slides for a forecasting course based on "Forecasting: Principles and Practice"

excel-to-python-data-science-intro-000

f1000_workflow

fiber-fermented-study

fsg

Foundations of Statistical Genomics

gae

Guided Auto Encoder

genelab-sampleprocessing

gut-microbiome

heart_rate_covid

hic-data-analysis-bootcamp

Workshop on measuring, analyzing, and visualizing the 3D genome with Hi-C data.

highres_microbiome_timecourse

Scripts for analyzing genetic variation in a high-resolution timecourse from the human gut microbiome

intro-to-rnaseq-hpc-salmon-flipped

Introduction to bulk RNA-seq

lapack

LAPACK development repository

learning-python-plotting

MIT Communication Lab - python plotting notes

lipidomics_analysis_2021

The Hitchhiker’s Guide to untargeted lipidomics analysis: Practical guidelines

machine-learning-for-time-series-with-python

Machine Learning for Time-Series with Python.Published by Packt

machine.learning.bootcamp.2019

SHARP Training Program, Mailman School of Public Health, Columbia University