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gtex_infil

Demographic and genetic factors influence the abundance of infiltrating immune cells in human tissues

hamfa

Hypoxia associated molecular feature analysis

hic_tools

A collection of tools for Hi-C data analysis

human-maps

Human1 metabolic maps

imcdataanalysis

R based workflow for multiplexed imaging data

immclass2019

immunedeconv

A unified interface to immune deconvolution methods (CIBERSORT, EPIC, quanTIseq, TIMER, xCell, MCPcounter)

immuneresistance

This resource provides the code developed in the study of Jerby-Arnon _et al. "Single-cell RNA-seq of melanoma ecosystems reveals sources of T cell exclusion linked to immunotherapy clinical outcomes".

immunophenogram

imputation

kaggle-house-prices-advanced-regression-techniques

Udacity capstone project: Kaggle competition on house prices prediction using advanced regression techniques

lawson2020

liger

R package for integrating and analyzing multiple single-cell datasets

mask_rcnn

Mask R-CNN for object detection and instance segmentation on Keras and TensorFlow

mcpcounter

ml-radiation

Machine learning prediction of tumor radiation response from multi-omics TCGA data

mljar-supervised

Automated Machine Learning Pipeline with Feature Engineering and Hyper-Parameters Tuning :rocket:

mtdna-mutations

scripts to generate figures/tables from Gorelick et al. Nat Metab, 2021

mutation-burden-of-pan-cancer

TCGA data (downloaded from cBioportal) was analyzed to summarize mutation burden in pan-cancers (totally 31 cancer types), ggplot2 was utilized to plot these results in alphabetic order.

mutspot

neopredpipe

Neoantigens prediction pipeline for multi- or single-region vcf files using ANNOVAR and netMHCpan.

netboxr

An R package to mark functional modules in the network analysis using data from pathwayCommons

neuralart_tensorflow

Implementation of "A Neural Algorithm of Artistic Style" by Tensorflow

ngs-structural-variations-review

collections of structural variations tools

nlp-roadmap

ROADMAP(Mind Map) and KEYWORD for students those who have interest in learning NLP

og-aws

📙 Amazon Web Services — a practical guide

pan-cancer-nuclei-instance-segmentation

Instance Segmentation of 5 Different Cancer Nuclei Across 19 Unique Tissue Types

pan-meyers-et-al

Code to reproduce analyses and figures from Pan, Meyers, et al.

pancanmet_analysis

Software and analysis of metabolism studies across multiple cancer types

panmyeloid