Comments (3)
antagomir
commented on June 7, 2024
This would be the file: vignettes/miaViz.Rmd and it is rendered online here.
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antagomir
commented on June 7, 2024
Could be done with the vaginal microbiota data set from Gajer et al. (2012) also to reproduce the figure I created for the review Faust et al. (2015). I have the data in phyloseq, could be converted to TreeSE with small modifications.
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ChouaibB
commented on June 7, 2024
Where can I get the phyloseq object?
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Related Issues (20)
- plotAbundance problem HOT 2
- Boxplots significance HOT 4
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- plotAbundanceDensity not working when counts assay is missing HOT 2
- Replace abund_values with assay_name
- print x-axis label in plotAbundance HOT 2
- Update the pkg in Bioc devel HOT 1
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- argument names
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