Comments (1)
This is a somewhat frequent issue on HPC with OpenCV Qt components. A work around is to use specific Qt and OpenCV versions. However in our case cv2
is only used once to encode byte streams (and the function name ('JPG') is confusingly inconsistent with the actual code ('PNG')):
Lines 36 to 40 in 5f60f0a
And this should be easily swapped out with PIL or similar so that we can stop depending on OpenCV.
Edit: we already depend on pillow
(PIL fork) through matplotlib
.
from waveorder.
Related Issues (20)
- Focus-finding features
- Make `torch` optional dependency? HOT 4
- waveorder changes matplotlib backend at import HOT 2
- torch meshgrid warning
- Torch warning about copying tensors HOT 1
- Divide by zero during phase normalization
- Move PTI reconstructions to `torch` and `models`
- Remove `waveorder_reconstructor` and `waveorder_simulator` files HOT 1
- Support GPUs via `torch` HOT 1
- Unused `pycromanager>=0.13.2` requirement
- Phase transfer function is numerically small HOT 3
- [Bug] Overlapping rings in phase transfer function HOT 5
- Tests fail on macbook with incomplete MPS support HOT 6
- 3D phase reconstruction should not use reflection padding HOT 2
- Non-negative fluorescence output? HOT 2
- Fluorescence deconvolution issues HOT 1
- Bump Python
- New release HOT 3
- Severe artifacts and blur in 2D phase reconstruction HOT 1
- Run CI on multiple platforms
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from waveorder.