mdozmorov / hic_tools Goto Github PK
View Code? Open in Web Editor NEWA collection of tools for Hi-C data analysis
License: MIT License
hic_tools's Issues
Some other hic scaffolder
Hi,
I found some other hic scaffolders
https://github.com/dfguan/pin_hic
https://github.com/kingforest93/EndHiC(https://github.com/fanagislab/EndHiC)
https://github.com/wtsi-hpag/scaffHiC
Best,
Kun
please move cLoops from TAD caller to loop caller (significant interaction caller)
Haplotype phasing
Would you consider add HiCHap
paper : https://doi.org/10.1186/s12864-020-07165-x
github : https://github.com/Prayforhanluo/HiCHap_master
Best!
From Assembly to chromosome bins
Hi,
We have a denovo plant genome assembly and HiC data but without any annotation. We would like to get 19 chromosome bins (19 FASTA files).
Which tool could work for us?
Thank you in advance,
Michal
Add Altmetrics badges to each paper
After each bibliography, add the following HTML code. Change DOI to the paper-specific one.
<span data-badge-type="4" data-doi="10.1101/2020.09.03.282186" data-hide-no-mentions="true" class="altmetric-embed"> </span>
This code will display an Altmetrics badge, to help prioritize publications.
Please, contribute by clicking the pen ("edit") button on the README.md file (upper-right corner), make edits, and it will create a pull request.
Recommend Projects
-
React
A declarative, efficient, and flexible JavaScript library for building user interfaces.
-
Vue.js
🖖 Vue.js is a progressive, incrementally-adoptable JavaScript framework for building UI on the web.
-
Typescript
TypeScript is a superset of JavaScript that compiles to clean JavaScript output.
-
TensorFlow
An Open Source Machine Learning Framework for Everyone
-
Django
The Web framework for perfectionists with deadlines.
-
Laravel
A PHP framework for web artisans
-
D3
Bring data to life with SVG, Canvas and HTML. 📊📈🎉
-
Recommend Topics
-
javascript
JavaScript (JS) is a lightweight interpreted programming language with first-class functions.
-
web
Some thing interesting about web. New door for the world.
-
server
A server is a program made to process requests and deliver data to clients.
-
Machine learning
Machine learning is a way of modeling and interpreting data that allows a piece of software to respond intelligently.
-
Visualization
Some thing interesting about visualization, use data art
-
Game
Some thing interesting about game, make everyone happy.
Recommend Org
-
Facebook
We are working to build community through open source technology. NB: members must have two-factor auth.
-
Microsoft
Open source projects and samples from Microsoft.
-
Google
Google ❤️ Open Source for everyone.
-
Alibaba
Alibaba Open Source for everyone
-
D3
Data-Driven Documents codes.
-
Tencent
China tencent open source team.