Code Monkey home page Code Monkey logo

cas_pt_ale_metaanalysis's Introduction

ALE Meta-Analysis of Perspective Taking Using NiMARE

The following code will conudct a coordinate-based activation liklihood estimation (ALE) meta-analysis of neuroimaging studies of cognitive, affective, and spatial perspective taking and attention switching in NiMARE (Salo et al., 2021). Then, it will compute conjunctions between the images using nilearn (Abraham et al., 2014).


This analysis was conducted for a manuscript in-preperation:
Brucato, M., Newcombe, N. S., & Chein, J. M., (in prep) A systematic ALE meta-analysis of spatial, cognitive, and affective perspective taking and dorsal attention.

Overview of Code Steps:

  1. Import modules, set parameters, and import data
  2. Run individual ALE meta-analyses using NiMARE
  3. Create cluster tables
  4. Compute conjunctions using nilearn

The Jupyter Notebook ('CAS_PT_ALE_MetaAnalysis_NiMARE.ipynb') generates the following visualizations:

Individual Domain ALE Maps

ALE maps for individual domains in the meta-analysis

Conjunction Maps

Conjunction images of individual ALE maps across domains

cas_pt_ale_metaanalysis's People

Contributors

mbrucato avatar

Watchers

 avatar

Recommend Projects

  • React photo React

    A declarative, efficient, and flexible JavaScript library for building user interfaces.

  • Vue.js photo Vue.js

    ๐Ÿ–– Vue.js is a progressive, incrementally-adoptable JavaScript framework for building UI on the web.

  • Typescript photo Typescript

    TypeScript is a superset of JavaScript that compiles to clean JavaScript output.

  • TensorFlow photo TensorFlow

    An Open Source Machine Learning Framework for Everyone

  • Django photo Django

    The Web framework for perfectionists with deadlines.

  • D3 photo D3

    Bring data to life with SVG, Canvas and HTML. ๐Ÿ“Š๐Ÿ“ˆ๐ŸŽ‰

Recommend Topics

  • javascript

    JavaScript (JS) is a lightweight interpreted programming language with first-class functions.

  • web

    Some thing interesting about web. New door for the world.

  • server

    A server is a program made to process requests and deliver data to clients.

  • Machine learning

    Machine learning is a way of modeling and interpreting data that allows a piece of software to respond intelligently.

  • Game

    Some thing interesting about game, make everyone happy.

Recommend Org

  • Facebook photo Facebook

    We are working to build community through open source technology. NB: members must have two-factor auth.

  • Microsoft photo Microsoft

    Open source projects and samples from Microsoft.

  • Google photo Google

    Google โค๏ธ Open Source for everyone.

  • D3 photo D3

    Data-Driven Documents codes.