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Variant Search Distributed Systems Assignment

Assignment

Treating data/variants.tsv.zip as source data:

  1. Write a Kafka producer which publishes records onto a Kafka topic
  2. Come with a strategy to populate published records into an Elasticsearch index
  3. Come with a strategy to populate published records into a postgres db table [Optional]

We're trying to mimic a 1 source -> 2 sink scenario, but you can choose to treat #3 as optional. Please craft solutions prioritizing maintainability and best practices.

Bootstrap

  • A docker-compose setup is provided as a starting point, which sets up Kafka, Zookeeper, Elasticsearch, Kibana & Postgres
  • Feel free to use a more compact setup which reduces # of individual pieces (eg: lenses.io)

Implementation

Python or a JVM language (Kotlin, Scala, Java) is preferred, but feel free to employ any programming language

variant-search-distributed-systems-assignment's People

Contributors

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