Code Monkey home page Code Monkey logo

hello-nextflow's Introduction

Hello World Pipeline

Nextflow

A modified version of the original hello world script from nextflow-io.

We test templates, passing files across processes, docker, local/cluster executions.

Description

4 processes, each of them appends a line (in a different language) to a file consumed by the next process. At the end of the execution, the content of the final file is shown.

Execution

Clone the project and run:

nextflow run main.nf -profile [local|cluster] 

or with pipeline sharing, just run:

nextflow run manuelesimi/hello-nextflow 

Output

$ nextflow run manuelesimi/hello-nextflow

N E X T F L O W  ~  version 20.01.0
Pulling manuelesimi/hello-nextflow ...
downloaded from https://github.com/manuelesimi/hello-nextflow.git
Launching `manuelesimi/hello-nextflow` [romantic_roentgen] - revision: ec3621d2c9 [master]
executor >  local (4)
[ce/b6e6c2] process > sayHelloInItalian [100%] 1 of 1 ✔
[6e/0a170c] process > sayHelloInFrench  [100%] 1 of 1 ✔
[55/b05258] process > sayHelloInSpanish [100%] 1 of 1 ✔
[f9/650a7c] process > sayHelloInEnglish [100%] 1 of 1 ✔
Nextflow says:
--- Welcome ---
Ciao world!
Bonjour world!
Hola world!
Hello world!

DAG visualization

DAG

References

hello-nextflow's People

Contributors

manuelesimi avatar

Watchers

 avatar  avatar

Recommend Projects

  • React photo React

    A declarative, efficient, and flexible JavaScript library for building user interfaces.

  • Vue.js photo Vue.js

    🖖 Vue.js is a progressive, incrementally-adoptable JavaScript framework for building UI on the web.

  • Typescript photo Typescript

    TypeScript is a superset of JavaScript that compiles to clean JavaScript output.

  • TensorFlow photo TensorFlow

    An Open Source Machine Learning Framework for Everyone

  • Django photo Django

    The Web framework for perfectionists with deadlines.

  • D3 photo D3

    Bring data to life with SVG, Canvas and HTML. 📊📈🎉

Recommend Topics

  • javascript

    JavaScript (JS) is a lightweight interpreted programming language with first-class functions.

  • web

    Some thing interesting about web. New door for the world.

  • server

    A server is a program made to process requests and deliver data to clients.

  • Machine learning

    Machine learning is a way of modeling and interpreting data that allows a piece of software to respond intelligently.

  • Game

    Some thing interesting about game, make everyone happy.

Recommend Org

  • Facebook photo Facebook

    We are working to build community through open source technology. NB: members must have two-factor auth.

  • Microsoft photo Microsoft

    Open source projects and samples from Microsoft.

  • Google photo Google

    Google ❤️ Open Source for everyone.

  • D3 photo D3

    Data-Driven Documents codes.