Comments (1)
Hi!
For now the parser is only able to take one, interleaved PE file.
My advice for now is to cat your three files and give it to BWISE with -x.
I will try to add a file of files option in order to facilitate this kind of problems.
from bwise.
Related Issues (18)
- ZeroDivisionError: division by zero HOT 8
- Running time HOT 2
- What is the final file ? HOT 1
- BWISE stops working properly when k=220
- replace "integral information" by something like "fully uses paired-end information"
- Default output directory should be "." but is ".." instead, leading to a crash HOT 1
- add information about the output in the README
- Unable to write tipped_out.unitigs.fa file HOT 5
- Checking dependencies?
- Unexpected error during graph construction: <class 'FileNotFoundError'> HOT 1
- Create a "dev" branch separate from the "stable" branch
- Add option to crush isolated bubbles HOT 2
- Haplo contigs not generated
- Test fails at Graph3: Construction
- Please add a copy of the AGPL to the source code
- One or several files could not be generated
- Problem with binary compilation of BWISE. HOT 4
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from bwise.