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rnmc's Introduction

Reaction Network Monte Carlo (RNMC) is a collection of programs for Monte Carlo simulation of statistical mechanical systems heavily inspired by SPPARKS. RNMC is designed to run large numbers of simulations of a fixed system in parallel. The project currently consists of four parts:

  • core : Core code shared by all simulators, for example IO, threading logic, and model independent simulation logic.
  • GMC : Implementation of Gillespie's next reaction simulator. GMC is able to run simulations of reaction networks with hundreds of millions of reactions, even when the number of species is small.
  • NPMC : A 3D statistical field theory simulator which supports one and two site interactions. Useful for simulating nano particles.
  • LGMC : A simulator that can include a static or dynamic lattice region and a homogeneous region and allows electrochemical as well as chemical reactions. Suitable for multi-phase simulations (e.g., heterogeneous catalysis, electrochemical plating or stripping).

Examples of research projects using RNMC:

Documentation

The complete documentation for RNMC can be found here. This includes a guide to installation, setting up simulations, testing, and more.

Dependencies

RNMC depends on GSL for pseudo random number generation and sqlite for the database interfaces.

rnmc's People

Contributors

danielbarter avatar espottesmith avatar lzichi avatar lrzichi avatar

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