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lh3 avatar lh3 commented on June 23, 2024

Thanks. I have also noticed some weird behavior of subgraph extraction, but I haven't gone into that.

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lh3 avatar lh3 commented on June 23, 2024

Sorry for coming back to this so late. Before 53eca7a, gfatools was using DFS to extract subgraphs. The extraction depends on which node is visited first. I don't understand its behavior sometimes, either. I have changed DFS to BFS. It should match the expectation better.

By the way, what command-line were you using to produce the graph layout? Thanks.

CC @snurk on #8

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lh3 avatar lh3 commented on June 23, 2024

Never mind about my question. It is gfaviz. Nice visualization. Would you provide precompiled binaries?

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ggonnella avatar ggonnella commented on June 23, 2024

Hi Heng Li. I am looking back at some old projects and I see that I never answered this comment, because I actually did not notice it. Sorry for that. Anyway gfaviz is in my Github https://github.com/ggonnella/gfaviz

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