levisc8 / spind Goto Github PK

• migrate to ggplot2 2.3. See here for more details

• deprecate plot = TRUE and customize_plot arguments, return plot object for user modification

• GEE

• WRM

• rvi.plot

• covar.plot + var.plot

• th.indep

• remove color.maps arguments from upscale and adjusted.actuals

SSIA

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Unsure why lattice will not enter NAMESPACE file properly. This creates conflicts when checking adjusted.actuals function

SSIA, see doc

SSIA

Continuous predictors only

SSIA

I am trying to use spind (and GEE) for the first time. I have 582 rows in my data set and lat/long coordinates. I have made sure tot urn the coordinates into integers. Every model I try to run returns the following error message:

Error in GEE(formula, data = dat1, coord = coords, family = "gaussian", :
length of data does not match length of coordinates

I am certain that both the coords matrix and the data file have the same length (582 lines) and there are no missing values. Has anyone else encountered this problem, and how did you resolve it?

Update based on GC's emailed description

SSIA

update GEE or create new function?

Hi,
I get this error but I am not sure what it means or how to fix it. All coordinates are cartesian and integer and not NAs in the data.

Error in gee::gee(formula = formula, family = family, data = data, id = id, :
NA/NaN/Inf in foreign function call (arg 14)
In addition: Warning message:
In log(log(ac05)/log(ac01)) : NaNs produced

Any hint on what the issue could be ? I can give you a repex ifneeded

SSIA

formula,family,data...

Examples for adjusted actuals will not currently pass check(). Investigate potential syntax/coding errors

see email from 24/2 1600

Only good for GEEs, cannot insert 0s into WRM since that will lead to erroneous signals (or lack thereof!)

also include examples of new plotting scheme

SSIA