Comments (2)
Hi @Nilad ,
Yes, it is possible using the following command:
panggolin info -p pangenome.h5 --content > summary_statistics.txt
Merci ;)
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Perfect ! Thanks =)
from ppanggolin.
Related Issues (20)
- ppanggolin msa --partition core HOT 6
- Writing gene-related data failed HOT 3
- error while writing genome annotations HOT 1
- ppanggolin projection: ValueError: The region is already with a different spot. HOT 2
- Add gene name info in the Tile Plot HOT 2
- 'ascii' codec HOT 1
- rarefaction curve : Population must be a sequence HOT 3
- Annotation error: gene coordinates exceeding contig length HOT 2
- conda installs old version HOT 2
- ValueError: The gene family has not beed associated to a partition. HOT 7
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- ValueError: max() iterable argument is empty HOT 5
- Segmentation Fault at Partition HOT 2
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- Let PPanGGOLIN keep running if partition step fails
- PPanGGOLiN version 2.1.1 - Failed building new version HOT 6
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- Can't use external clustering: "Exception: Representative gene has not been set" HOT 7
- Population must be a sequence HOT 3
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