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generate_deformation_fields

Given an input Jacobian determinant, this code will generate a deformation field that produces that Jacobian field. (Made for MINC format files)

gpu-edu-workshops

handson-ml

A series of Jupyter notebooks that walk you through the fundamentals of Machine Learning and Deep Learning in python using Scikit-Learn and TensorFlow.

hello_world

my first repository

hippo-surf-analysis

test

iclabel

Automatic EEG IC classification plugin for EEGLAB

imageqc

Quality Control in medical imaging

jacobiantests

very basic test of jacobian

jspsych

A JavaScript library for creating and running behavioral experiments in a web browser

labs

This is a collection of tutorials for learning how to use Docker with various tools. Contributions welcome.

livewire

Livewire algorithm for image segmentation

matdrab2matfab

MATLAB and data science course, taking you from MATDRAB to MATFAB in 8 weeks! General course covering the basics of MATLAB, Signal processing, Statistics, and Machine Learning

mccode

The home of the McStas (neutrons) and McXtrace (x-rays) Monte-Carlo ray-tracing instrument simulation codes.

mne-python

MNE : Magnetoencephalography (MEG) and Electroencephalography (EEG) in Python

mriqc

Automated Quality Control and visual reports for Quality Assesment of structural (T1w, T2w) and functional MRI of the brain

mriquality

Tools for routine quality assurance and post-acquisition MRI data quality control

muse_brain_display

Display of 3-D brain activity from the Muse EEG headset

neurocombat

Harmonizing neuroimaging data across scanners and sites

neuropower

sample size calculations for fMRI

neurovault

Easy to use web database for statistical maps.

nimg-scripts

Scripts for batch processing neuroimaging data

nspn_whitakervertes_pnas2016

Data and analysis code to reproduce the NSPN Manuscript "Adolescence is associated with genomically patterned consolidation of the hubs of the human brain connectome".

oasis-scripts

Example download scripts for the OASIS3 project

openct2

openface

OpenFace – a state-of-the art tool intended for facial landmark detection, head pose estimation, facial action unit recognition, and eye-gaze estimation.

osfclient

A python library and command-line client for file storage on OSF

pandoc-gfm

Howto pandoc markdown with latex contents in github project, especially serving it as README.md

pandoc-scholar

Create beautiful and semantically meaningful articles with pandoc.

picard

Preconditioned ICA for Real Data

ppda

Probability Density Approximation Using Graphics Processing Unit