Code Monkey home page Code Monkey logo

ai's Introduction

Ascomycete_T1-PKSs

From antismash database. https://antismash-db.secondarymetabolites.org/query gene BGC type = t1pks Phylum = Ascomycota

protein-matching-IPR020841

https://www.ebi.ac.uk/interpro/entry/InterPro/IPR020841/protein/UniProt/taxonomy/uniprot/4890/#table

Clustalw/o alignment

/home/kkj/AI/clustalw/clustalw2 -infile=filtered_PKSs.fa -outfile=my_alignment.aln /home/kkj/AI/clustalo/clustalo-1.2.4-Ubuntu-x86_64 -i filtered_PKSs.fa -o clustalo_alignment.aln --outfmt=fasta -v --threads=16

with screen: screen -L -Logfile logs/screen_log.txt -dmS clustalo /home/kkj/AI/clustalo/clustalo-1.2.4-Ubuntu-x86_64 -i filtered_PKSs.fa -o clustalo_alignment.aln --outfmt=fasta -v --threads=16 > clustalo_stdout.out

Recommend Projects

  • React photo React

    A declarative, efficient, and flexible JavaScript library for building user interfaces.

  • Vue.js photo Vue.js

    🖖 Vue.js is a progressive, incrementally-adoptable JavaScript framework for building UI on the web.

  • Typescript photo Typescript

    TypeScript is a superset of JavaScript that compiles to clean JavaScript output.

  • TensorFlow photo TensorFlow

    An Open Source Machine Learning Framework for Everyone

  • Django photo Django

    The Web framework for perfectionists with deadlines.

  • D3 photo D3

    Bring data to life with SVG, Canvas and HTML. 📊📈🎉

Recommend Topics

  • javascript

    JavaScript (JS) is a lightweight interpreted programming language with first-class functions.

  • web

    Some thing interesting about web. New door for the world.

  • server

    A server is a program made to process requests and deliver data to clients.

  • Machine learning

    Machine learning is a way of modeling and interpreting data that allows a piece of software to respond intelligently.

  • Game

    Some thing interesting about game, make everyone happy.

Recommend Org

  • Facebook photo Facebook

    We are working to build community through open source technology. NB: members must have two-factor auth.

  • Microsoft photo Microsoft

    Open source projects and samples from Microsoft.

  • Google photo Google

    Google ❤️ Open Source for everyone.

  • D3 photo D3

    Data-Driven Documents codes.