Code Monkey home page Code Monkey logo

vripy's Introduction

A Voronoi Based Method for Extracting Features from Crystals for Quantum Machine Learning

This is my solution to the NOMAD 2018 Transparent Conducting Oxide Kaggle, where we were asked to predict formation energies and bandgaps of candidate sesquioxide materials. This work was inspired by the work of Ward, et al., who has produced a similar package in Java using Magpie. This package will reproduce the features used in my best solution, Private Leaderboard 0.0567 #11, with a simple XGBRegressor. Simply modify the loading commands in the beginning of the script to load an .ase format crystal structure and produce a pandas dataframe with features.

Getting Started

These instructions will get you a copy of the project up and running on your local machine for development and testing purposes.

Prerequisites

Currently tested with:

python 3.6.4
numpy 1.13.3
scipy 1.0.0
pandas 0.22.0
networkx 2.1
tess 0.1.3

Running the scripts

python TesselateandFeaturize.py 

Yields Pandas dataframe with features for all the training structures from the NOMAD 2018 Kaggle.

Authors

  • Karl Hujsak - Initial work - khujsak

Acknowledgments

  • Logan Ward

vripy's People

Contributors

khujsak avatar

Stargazers

 avatar  avatar  avatar  avatar  avatar  avatar  avatar  avatar

Watchers

 avatar

Recommend Projects

  • React photo React

    A declarative, efficient, and flexible JavaScript library for building user interfaces.

  • Vue.js photo Vue.js

    ๐Ÿ–– Vue.js is a progressive, incrementally-adoptable JavaScript framework for building UI on the web.

  • Typescript photo Typescript

    TypeScript is a superset of JavaScript that compiles to clean JavaScript output.

  • TensorFlow photo TensorFlow

    An Open Source Machine Learning Framework for Everyone

  • Django photo Django

    The Web framework for perfectionists with deadlines.

  • D3 photo D3

    Bring data to life with SVG, Canvas and HTML. ๐Ÿ“Š๐Ÿ“ˆ๐ŸŽ‰

Recommend Topics

  • javascript

    JavaScript (JS) is a lightweight interpreted programming language with first-class functions.

  • web

    Some thing interesting about web. New door for the world.

  • server

    A server is a program made to process requests and deliver data to clients.

  • Machine learning

    Machine learning is a way of modeling and interpreting data that allows a piece of software to respond intelligently.

  • Game

    Some thing interesting about game, make everyone happy.

Recommend Org

  • Facebook photo Facebook

    We are working to build community through open source technology. NB: members must have two-factor auth.

  • Microsoft photo Microsoft

    Open source projects and samples from Microsoft.

  • Google photo Google

    Google โค๏ธ Open Source for everyone.

  • D3 photo D3

    Data-Driven Documents codes.