Code Monkey home page Code Monkey logo

vivo's Introduction

VIVO: Connect, Share, Discover

Build Deploy DOI

VIVO is an open source semantic web tool for research discovery -- finding people and the research they do.

VIVO supports editing, searching, browsing and visualizing research activity in order to discover people, programs, facilities, funding, scholarly works and events. VIVO's search returns results faceted by type for rapid retrieval of desired information across disciplines.

Resources

VIVO Project web site

http://vivoweb.org/

VIVO Project Wiki

https://wiki.lyrasis.org/display/VIVO/

Installation Instructions

Installation instructions for the latest release can be found at this location on the wiki:
https://wiki.lyrasis.org/display/VIVODOC112x/Installing+VIVO

Docker

VIVO docker container is available at vivoweb/vivo with accompanying vivoweb/vivo-solr. These can be used independently or with docker-compose.

Docker Compose

Docker Compose environment variables:

.env defaults

LOCAL_VIVO_HOME=./vivo-home
RESET_HOME=false
RESET_CORE=false
  • LOCAL_VIVO_HOME: VIVO home directory on your host machine which will mount to volume in docker container. Set this environment variable to persist your VIVO data on your host machine.
  • RESET_HOME: Convenience to reset VIVO home when starting container. Caution, will delete local configuration, content, and configuration model.
  • RESET_CORE: Convenience to reset VIVO Solr core when starting container. Caution, will require complete reindex.

Before building VIVO, you will also need to clone (and switch to the same branch, if other than main) of Vitro. The Vitro project must be cloned to a sibling directory next to VIVO so that it can be found during the build. You will also need to clone (and switch to the appropriate branch) of Vitro-languages and VIVO-languages.

Build and start VIVO.

  1. In Vitro-languages, run:
mvn install
  1. In VIVO-languages, run:
mvn install
  1. In VIVO (with Vitro cloned alongside it), run:
mvn clean package -s installer/example-settings.xml
docker-compose up

Docker Image

To build and run local Docker image.

docker build -t vivoweb/vivo:development .
docker run -p 8080:8080 vivoweb/vivo:development

Contact us

There are several ways to contact the VIVO community. Whatever your interest, we would be pleased to hear from you.

Contact form

https://vivo.lyrasis.org/contact/

Mailing lists

This updates list provides news to the VIVO community of interest to all.

Join the VIVO community! Here you'll find non-technical discussion regarding participation, the VIVO conference, policy, project management, outreach, and engagement.

The best place to get your hands dirty in the VIVO Project. Developers and implementers frequent this list to get the latest on feature design, development, implementation, and testing.

Contributing Code

If you would like to contribute code to the VIVO project, please open a ticket in our JIRA, and prepare a pull request that references your ticket. Contributors welcome!

Citing VIVO

If you are using VIVO in your publications or projects, please cite the software paper in the Journal of Open Source Software:

BibTeX

@article{Conlon2019,
  doi = {10.21105/joss.01182},
  url = {https://doi.org/10.21105/joss.01182},
  year = {2019},
  publisher = {The Open Journal},
  volume = {4},
  number = {39},
  pages = {1182},
  author = {Michael Conlon and Andrew Woods and Graham Triggs and Ralph O'Flinn and Muhammad Javed and Jim Blake and Benjamin Gross and Qazi Asim Ijaz Ahmad and Sabih Ali and Martin Barber and Don Elsborg and Kitio Fofack and Christian Hauschke and Violeta Ilik and Huda Khan and Ted Lawless and Jacob Levernier and Brian Lowe and Jose Martin and Steve McKay and Simon Porter and Tatiana Walther and Marijane White and Stefan Wolff and Rebecca Younes},
  title = {{VIVO}: a system for research discovery},
  journal = {Journal of Open Source Software}
}

vivo's People

Contributors

tworrall avatar grahamtriggs avatar j2blake avatar brianjlowe avatar hudajkhan avatar hlm7 avatar jcorson55 avatar roflinn avatar mconlon17 avatar gneissone avatar chenejac avatar litvinovg avatar drspeedo avatar bdc34 avatar nateprewitt avatar hauschke avatar wwelling avatar dependabot[bot] avatar smmckay avatar awoods avatar aviggio avatar arfon avatar delsborg avatar lwrubel avatar edemerzel avatar stefan-wolff avatar lawlesst avatar vivo-uab avatar mchid avatar diatomsrcool avatar

Recommend Projects

  • React photo React

    A declarative, efficient, and flexible JavaScript library for building user interfaces.

  • Vue.js photo Vue.js

    ๐Ÿ–– Vue.js is a progressive, incrementally-adoptable JavaScript framework for building UI on the web.

  • Typescript photo Typescript

    TypeScript is a superset of JavaScript that compiles to clean JavaScript output.

  • TensorFlow photo TensorFlow

    An Open Source Machine Learning Framework for Everyone

  • Django photo Django

    The Web framework for perfectionists with deadlines.

  • D3 photo D3

    Bring data to life with SVG, Canvas and HTML. ๐Ÿ“Š๐Ÿ“ˆ๐ŸŽ‰

Recommend Topics

  • javascript

    JavaScript (JS) is a lightweight interpreted programming language with first-class functions.

  • web

    Some thing interesting about web. New door for the world.

  • server

    A server is a program made to process requests and deliver data to clients.

  • Machine learning

    Machine learning is a way of modeling and interpreting data that allows a piece of software to respond intelligently.

  • Game

    Some thing interesting about game, make everyone happy.

Recommend Org

  • Facebook photo Facebook

    We are working to build community through open source technology. NB: members must have two-factor auth.

  • Microsoft photo Microsoft

    Open source projects and samples from Microsoft.

  • Google photo Google

    Google โค๏ธ Open Source for everyone.

  • D3 photo D3

    Data-Driven Documents codes.