course about NGS data processing: genomics and transcriptomics

Nd-1 sequencing reads for de novo genome assembly and read mapping against Col-0 reference: 10.4119/unibi/2941047

References:

NGS assembly of Nd-1 and origin of sequencing reads: https://doi.org/10.1371/journal.pone.0164321

improved annotation: https://doi.org/10.1186/s13104-017-2985-y

PacBio assemlby of Nd-1: https://doi.org/10.1101/407627

De novo transcriptome assembly: https://doi.org/10.3389/fmolb.2018.00062

Integrating Molecular Biology and Bioinformatics Education: https://doi.org/10.1515/jib-2019-0005

Contact: https://www.cebitec.uni-bielefeld.de/~bpucker