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myriad

Myriad, a GPU-aware biophysical neuronal simulator.

neurogateway

HPC Version of 3Drodent

neuroinf-archive

Archived version of Neuroinf.org

neuroml-db

database of neuroml models

neuroml2

This repository hosts the NeuroML 2 Schema, the ComponentType definitions in LEMS and the core documentation of NeuroML2.

neuromlwebsite

The latest version of the NeuroML website

neuron-docker

NEURON simulator Docker images

neuronunit

A package for data-driven validation of neuron and ion channel models using SciUnit

olfactorybulb

Biophysically Realistic Model of the Olfactory Bulb Mitral-Tufted-Granule Cell Pathway

org.neuroml.export

Export from NeuroML & LEMS

osb-model-validation

Tools for automated model validation in OpenSourceBrain projects

pinskyrinzelmodel

Reduced CA3 cell model from Pinsky & Rinzel 1994

pospischiletal2008

Conversion to NeuroML of cell models from: *Minimal Hodgkin–Huxley type models for different classes of cortical and thalamic neurons*, Martin Pospischil, Maria Toledo-Rodriguez, Cyril Monier, Zuzanna Piwkowska, Thierry Bal, Yves Frégnac, Henry Markram and Alain Destexhe, Biological Cybernetics, 2008

pylmeasure

Python wrapper for L-measure

pyneuron-toolbox

Some python functions to supplement the NEURON python module

redmine

This is a customised version of redmine for the Open Source Brain website

scidash

A collection of candidates, tests, and records for use with SciDash.

scidash.github.io

Website for SciDash/SciUnit

sciunit

A Python framework for formal, data-driven validation of scientific models.

skorch

A scikit-learn compatible neural network library that wraps PyTorch

so-tech-tracker

sphinx_rtd_theme

Sphinx theme for readthedocs.org

sphinxtr

The Sphinx Thesis Resource

swarmsight

SwarmSight is a published video analysis tool with modules to a) to track insect antenna and proboscis movements and b) assess the aggregate movement or activity levels of groups or swarms of animals. Developed at Arizona State University, it is used by behavioral scientists to study the behavior of insects, birds, fish, and other animals.

thalamocortical

GitHub repository for an OSB project containing a thalamocortical network model based on Traub et al. 2005

vrview