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peanut

Requires: scikit-bio https://github.com/biocore/scikit-bio

Little tools for converting from a DNA / RNA sequence to amino acid sequence

Current uses:

  • Determine amino acid sequence from DNA sequencing data for single protein (saves a new file with the amino acid sequence, and also prints it out just for funsies)
  • Calculate total resultant mutant protein space from single or double nucleotide mutations
  • Calculate extinction coefficient and molecular weight of a protein
  • Design forward and reverse primers for desired site-directed mutagenesis

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