Comments (4)
were you able to install it?
when I try with BiocManager::install("jtleek/genstats", ref="gh-pages")
I get this error:
ERROR: dependency ‘RSkittleBrewer’ is not available for package ‘genstats’
* removing ‘/home/franasa/R/x86_64-redhat-linux-gnu-library/3.6/genstats’
Error: Failed to install 'genstats' from GitHub:
(converted from warning) installation of package ‘/tmp/RtmpdNz6Kk/file111b347431de/genstats_0.1.02.tar.gz’ had non-zero exit status
with R 3.6.3 running on Fedora 31
from genstats.
Since I wanted the markdown and source code for the course, I just cloned the repository.
git clone https://github.com/jtleek/genstats
Then I was able to find the files in the vignettes sub directory.
With regards the error, I think you should install SkittleBrewer:
BiocManager::install('RSkittleBrewer')
This should work fine. Try and let me know what you get. Cheers
from genstats.
thanks!, I got an answer from one of the course mentors:
'RSkittleBrewer' is not a Bioconductor package and, thus, you cannot use 'BiocManager' to install it.
Try instead:
library(devtools)
devtools::install_github('alyssafrazee/RSkittleBrewer')
this worked for me.
from genstats.
BiocManager is able to install as well. Try it and see. I was also surprised.
from genstats.
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from genstats.