Name: Josh Herr
Type: User
Company: University of Nebraska
Bio: I am an Assistant Professor at the University of Nebraska. I study the genomics and metagenomics of plant-microbe interactions with a focus on mycology.
Location: Lincoln, NE, USA
Blog: http://joshuaherr.com
2014-01-27-indiana
Bootcamp at Indiana University Jan 2014
2014-03-17-purdue
Bootcamp at Purdue University in March 2014
2014-04-29-gwu
Software Carpentry Bootcamp at George Washington University on April 29th-30th 2014
2014-06-26-nd
Software Carpentry Bootcamp on June 26th-27th, 2014, at Notre Dame University
2014-07-10-esip
Software Carpentry Bootcamp on July 10th-11th, 2014, at ESIP meeting in Frisco, CO, USA
2014-07-24-beacon
Data Carpentry workshop July 24-25 BEACON
2014-09-11-udel
Software Carpentry Bootcamp on September 11th-12th, 2014, at the University of Delaware
2015-01-27-msu_icer
Software Carpentry Bootcamp held at Michigan State University on January 27th to 29th, 2015
2016-02-22-isu
2016-03-07-uconn
2017-09-03-creighton_university
Repo for Software Carpentry at Creighton University, August 3rd & 4th, 2016
2022-04-01-prof_dev_social_media
alignerviz
A simple tool to visualize sequences using Vlachos et al's technique
american-gut
American Gut open-access data and IPython notebooks
arcdiagram
R package arcdiagram
ascii_plots
Convenience function for quick and dirty data analysis
bc
Template for Software Carpentry bootcamp site repository.
bedtools2
A powerful toolset for genome arithmetic.
bgi-data-analysis
assemblies, annotations, further analysis on sequenced strains from the EHEC outbreak
binger
BinGeR: in-situ Genome recovery tool for series metagenomes
bio-info-hack
Research code for various bioinformatics projects
bioinformatics
Tools for bioinformatics
bioinformatics_scripts
Just a bunch of scripts I use for bioinformatics -- feel free to use, reuse, and improve
blacktie
Blacktie: a streamlined interface to the popular tophat/cufflinks RNA-seq pipeline
boring
Boring website.
bugbuilder
Hands-free microbial genome assembly
cheat_sheets
chicken
This is the chicken paper repositiory
cloaked-octo-wallhack
This is Josh's working folder for daily progress reports
conditionallyraretaxa
R scripts and tutorial datasets to detect conditionally rare taxa in time series of microbial communities
React
A declarative, efficient, and flexible JavaScript library for building user interfaces.
🖖 Vue.js is a progressive, incrementally-adoptable JavaScript framework for building UI on the web.
Typescript
TypeScript is a superset of JavaScript that compiles to clean JavaScript output.
An Open Source Machine Learning Framework for Everyone
Django
The Web framework for perfectionists with deadlines.
Laravel
A PHP framework for web artisans
Bring data to life with SVG, Canvas and HTML. 📊📈🎉
JavaScript (JS) is a lightweight interpreted programming language with first-class functions.
Some thing interesting about web. New door for the world.
A server is a program made to process requests and deliver data to clients.
Machine learning is a way of modeling and interpreting data that allows a piece of software to respond intelligently.
Some thing interesting about visualization, use data art
Some thing interesting about game, make everyone happy.
Facebook
We are working to build community through open source technology. NB: members must have two-factor auth.
Microsoft
Open source projects and samples from Microsoft.
Google
Google ❤️ Open Source for everyone.
Alibaba
Alibaba Open Source for everyone
D3
Data-Driven Documents codes.
Tencent
China tencent open source team.
