joshualiuxu Goto Github PK

ggeffects

Estimated Marginal Means and Marginal Effects from Regression Models for ggplot2

ggmap

A package for plotting maps in R with ggplot2

ggsignif

Easily add significance brackets to your ggplots

ggstatsplot

Enhancing `ggplot2` plots with statistical analysis 📊🎨📣

ggtree

:christmas_tree:Visualization and annotation of phylogenetic trees

ghost-tree-trees

This is where you can get **pre-built** ghost trees for your ITS diversity analysis! :)

google-research

Google Research

greta

simple and scalable statistical modelling in R

hmsc

icamp1

Infer Community Assembly Mechanisms by Phylogenetic bin-based null model analysis (Version 1)

joshualiuxu

Config files for my GitHub profile.

joshualiuxu.github.io

jsdm

:package: R package for joint species distribution models

lavaan

an R package for structural equation modeling and more

lefse

liu2020proteincell

Pipeline & Reproducible analysis examples for amplicon and metagenome in microbiome

lmmfit

Goodness-of-fit-measures for linear mixed models with one-level-grouping

microbiotaprocess

microeco

An R package for data analysis in microbial community ecology

microviz

R package for microbiome data visualization. Uses phyloseq, vegan and tidyverse. See website link for docs with visual examples. Docker image available.

ml_for_hackers

Code accompanying the book "Machine Learning for Hackers"

modelbased

:chart_with_upwards_trend: Estimate effects, contrasts and means based on statistical models

modelsummary

Beautiful and customizable model summaries in R.

modler

An ecological niche model workflow based on dismo

morerangechangesims

Simulation Study for occupancy models

mvabund

mvabund updates

network-motifs-explain-soil-organism-coexistence-and-biodiversity

nst

Normalized Stochasticity Ratio in community assembly

numericalecology

code for Numerical Ecology with R

olsrr

Tools for developing linear regression models