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evotestr's Introduction

This code is a work in progress and is based on code written by @willpearse. The initial project came from code written for a project in his class taught at USU.

This is an attempt to simulate evolution on herbivores experiencing food limitations due to elevation.

Each herbivore has 20 base pairs. Every 5 bases codes for one enzyme directly. I will eventually implement:

  • transcription into RNA
  • translation into proteins
  • expresion inro enzymes Yay... I hope this ends up working...

evotestr's People

Watchers

James Cloos avatar Will Pearse avatar

evotestr's Issues

Fixing data storage and inheritance

  • Change herbivore log file to a matrix that will contain herbivore data
  • User can define the rate of log file creation
  • Matrix will be outputted as a log file
  • Figure out a way to make bases inheritable when reproducing (making a new herbivore)
  • Make a wrapper to launch different tests for the simulation

POSSIBLE AREAS OF STUDY

  • Can study coexistence
  • Can introduce linkage disequilibrium
  • Studying mutations with large phenotypic effect
  • Do they have large or small effects
  • Excludes standing genetic variation
  • Adaptation from new mutations

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