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John Pablo Mendieta 's Projects

ngs_data_processing icon ngs_data_processing

Tool set for processing fasta/fastq/table formated data. Usually they are perl scripts.

nomorescripting icon nomorescripting

I am sick of writing the same parsers day after day. So this module seeks to minimize my time writing the same files again and again

rosalindproblems icon rosalindproblems

The Rosalind scripts I have created to solve the bioinformatics problems on Rosalind.info

sctransform icon sctransform

R package for modeling single cell UMI expression data using regularized negative binomial regression

snapatac icon snapatac

Analysis Pipeline for Single Cell ATAC-seq

tiberius- icon tiberius-

A simple script to go through the output of an Apollo Annotation and return only filed with a "good" start codon "M".

vim-snippets icon vim-snippets

vim-snipmate default snippets (Previously snipmate-snippets)

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