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scripts-slurm's Introduction

README

Esta versión de los scripts upgraded, están modificados para:

Para ejecuciones 1 instancia - Multithread##

  • Tener en cuenta el tiempo de carga de los mappers.
  • Resultados más estable con ficheros que son 5 veces el tamaño original.
  • Saber la fecha en la que entran en el sistema.

Para ejecuciones multiples instancias - Multithread##

  • Aislar posible interferencia del sistema de archivo, replicando los datos de entrada y el genoma.
  • Tener en cuenta el tiempo de carga de los mappers.
  • Resultados más estable con ficheros que son 5 veces el tamaño original.
  • Saber la fecha en la que entran en el sistema.

Mappers Used

  • BWA
  • Bowtie
  • GEM
  • Snap
  • NovoAlign

Test Performed

  • Scalability
  • Locality
  • Interleave
  • Partitioning

scripts-slurm's People

Watchers

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