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cecog

A fast and cross-platform image analysis framework for fluorescence time-lapse microscopy and bioimage informatics.

cellom2tif

Python command line interface to convert Cellomics .C01 files to TIFF.

cellprofiler

An open-source application for biological image analysis

centrosome

An open source image processing library

conda

Cross-platform, Python-agnostic binary package manager

conda-build

Commands and tools for building conda packages

conda-env

Provides a unified interface to dealing with Conda environments.

conda-zsh-completion

zsh completion for conda

condarc

My configuration file for the conda package management system.

config

A master repository for all my configuration files

cookiecutter-napari-plugin

Cookiecutter for napari plugins

csi-camera

Simple example of using a CSI-Camera (like the Raspberry Pi Version 2 camera) with the NVIDIA Jetson Developer Kit

czi-joint-python-accelerators-project

Join Python Accelerators Project application (CZI program)

dask

Parallel computing with task scheduling

dask-image

Distributed image processing

dask-jobqueue

Deploy Dask on job schedulers like PBS, SLURM, and SGE

data_tidying_and_visualisation

Workshops on Pandas, data tidying, and visualisation

defdap

A python library for correlating EBSD and HRDIC data

distributed

A distributed task scheduler for Dask

elegant-scipy

Draft of the book Elegant SciPy for O'Reilly

elegant-scipy-submissions

Submissions of code snippets for the book Elegant SciPy

elements-of-python-style

Goes beyond PEP8 to discuss what makes Python code feel great. A Strunk & White for Python.

enrich2

explode-view

Show exploded view of an image.

fastplotlib

A fast plotting library

fibo

draw fibo with turtle

fiji-python

Template project to make Python command-line tools to be run by Fiji

flatten

Flatten files in nested subdirectories into a single directory.

fpl-napari

prototype of napari with fastplolib as the graphics backend

framework-python-fail

A minimal example to demonstrate the need for a framework Python build in conda-forge and Anaconda