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tikz-bayesnet's Issues

Plate label position

Hi

Is it able to manually set the position of a plate's label?

Regards
Johnny

Avoid having "Missing character: There is no ; in font nullfont!" warnings

When using bayesnet, many warnings like the following appear, even when running pdflatex on the example example.tex file. Is there any way to avoid them?

Missing character: There is no ; in font nullfont!

These are my logs (everything installed by ubuntu packages):

$ pdflatex example.tex 
This is pdfTeX, Version 3.141592653-2.6-1.40.24 (TeX Live 2022/Debian) (preloaded format=pdflatex)
 restricted \write18 enabled.
entering extended mode
(./example.tex
LaTeX2e <2022-06-01> patch level 5
L3 programming layer <2022-07-15>
(/usr/share/texlive/texmf-dist/tex/latex/base/article.cls
Document Class: article 2021/10/04 v1.4n Standard LaTeX document class
(/usr/share/texlive/texmf-dist/tex/latex/base/size10.clo))
(/usr/share/texlive/texmf-dist/tex/latex/pgf/frontendlayer/tikz.sty
(/usr/share/texlive/texmf-dist/tex/latex/pgf/basiclayer/pgf.sty
(/usr/share/texlive/texmf-dist/tex/latex/pgf/utilities/pgfrcs.sty
(/usr/share/texlive/texmf-dist/tex/generic/pgf/utilities/pgfutil-common.tex
(/usr/share/texlive/texmf-dist/tex/generic/pgf/utilities/pgfutil-common-lists.t
ex)) (/usr/share/texlive/texmf-dist/tex/generic/pgf/utilities/pgfutil-latex.def
) (/usr/share/texlive/texmf-dist/tex/generic/pgf/utilities/pgfrcs.code.tex
(/usr/share/texlive/texmf-dist/tex/generic/pgf/pgf.revision.tex)))
(/usr/share/texlive/texmf-dist/tex/latex/pgf/basiclayer/pgfcore.sty
(/usr/share/texlive/texmf-dist/tex/latex/graphics/graphicx.sty
(/usr/share/texlive/texmf-dist/tex/latex/graphics/keyval.sty)
(/usr/share/texlive/texmf-dist/tex/latex/graphics/graphics.sty
(/usr/share/texlive/texmf-dist/tex/latex/graphics/trig.sty)
(/usr/share/texlive/texmf-dist/tex/latex/graphics-cfg/graphics.cfg)
(/usr/share/texlive/texmf-dist/tex/latex/graphics-def/pdftex.def)))
(/usr/share/texlive/texmf-dist/tex/latex/pgf/systemlayer/pgfsys.sty
(/usr/share/texlive/texmf-dist/tex/generic/pgf/systemlayer/pgfsys.code.tex
(/usr/share/texlive/texmf-dist/tex/generic/pgf/utilities/pgfkeys.code.tex
(/usr/share/texlive/texmf-dist/tex/generic/pgf/utilities/pgfkeysfiltered.code.t
ex)) (/usr/share/texlive/texmf-dist/tex/generic/pgf/systemlayer/pgf.cfg)
(/usr/share/texlive/texmf-dist/tex/generic/pgf/systemlayer/pgfsys-pdftex.def
(/usr/share/texlive/texmf-dist/tex/generic/pgf/systemlayer/pgfsys-common-pdf.de
f)))
(/usr/share/texlive/texmf-dist/tex/generic/pgf/systemlayer/pgfsyssoftpath.code.
tex)
(/usr/share/texlive/texmf-dist/tex/generic/pgf/systemlayer/pgfsysprotocol.code.
tex)) (/usr/share/texlive/texmf-dist/tex/latex/xcolor/xcolor.sty
(/usr/share/texlive/texmf-dist/tex/latex/graphics-cfg/color.cfg)
(/usr/share/texlive/texmf-dist/tex/latex/graphics/mathcolor.ltx))
(/usr/share/texlive/texmf-dist/tex/generic/pgf/basiclayer/pgfcore.code.tex
(/usr/share/texlive/texmf-dist/tex/generic/pgf/math/pgfmath.code.tex
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(/usr/share/texlive/texmf-dist/tex/generic/pgf/math/pgfmathutil.code.tex)
(/usr/share/texlive/texmf-dist/tex/generic/pgf/math/pgfmathparser.code.tex)
(/usr/share/texlive/texmf-dist/tex/generic/pgf/math/pgfmathfunctions.code.tex
(/usr/share/texlive/texmf-dist/tex/generic/pgf/math/pgfmathfunctions.basic.code
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(/usr/share/texlive/texmf-dist/tex/generic/pgf/math/pgfmathfunctions.trigonomet
ric.code.tex)
(/usr/share/texlive/texmf-dist/tex/generic/pgf/math/pgfmathfunctions.random.cod
e.tex)
(/usr/share/texlive/texmf-dist/tex/generic/pgf/math/pgfmathfunctions.comparison
.code.tex)
(/usr/share/texlive/texmf-dist/tex/generic/pgf/math/pgfmathfunctions.base.code.
tex)
(/usr/share/texlive/texmf-dist/tex/generic/pgf/math/pgfmathfunctions.round.code
.tex)
(/usr/share/texlive/texmf-dist/tex/generic/pgf/math/pgfmathfunctions.misc.code.
tex)
(/usr/share/texlive/texmf-dist/tex/generic/pgf/math/pgfmathfunctions.integerari
thmetics.code.tex)))
(/usr/share/texlive/texmf-dist/tex/generic/pgf/math/pgfmathfloat.code.tex))
(/usr/share/texlive/texmf-dist/tex/generic/pgf/math/pgfint.code.tex)
(/usr/share/texlive/texmf-dist/tex/generic/pgf/basiclayer/pgfcorepoints.code.te
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(/usr/share/texlive/texmf-dist/tex/generic/pgf/basiclayer/pgfcorepathconstruct.
code.tex)
(/usr/share/texlive/texmf-dist/tex/generic/pgf/basiclayer/pgfcorepathusage.code
.tex)
(/usr/share/texlive/texmf-dist/tex/generic/pgf/basiclayer/pgfcorescopes.code.te
x)
(/usr/share/texlive/texmf-dist/tex/generic/pgf/basiclayer/pgfcoregraphicstate.c
ode.tex)
(/usr/share/texlive/texmf-dist/tex/generic/pgf/basiclayer/pgfcoretransformation
s.code.tex)
(/usr/share/texlive/texmf-dist/tex/generic/pgf/basiclayer/pgfcorequick.code.tex
)
(/usr/share/texlive/texmf-dist/tex/generic/pgf/basiclayer/pgfcoreobjects.code.t
ex)
(/usr/share/texlive/texmf-dist/tex/generic/pgf/basiclayer/pgfcorepathprocessing
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(/usr/share/texlive/texmf-dist/tex/generic/pgf/basiclayer/pgfcorearrows.code.te
x)
(/usr/share/texlive/texmf-dist/tex/generic/pgf/basiclayer/pgfcoreshade.code.tex
)
(/usr/share/texlive/texmf-dist/tex/generic/pgf/basiclayer/pgfcoreimage.code.tex

(/usr/share/texlive/texmf-dist/tex/generic/pgf/basiclayer/pgfcoreexternal.code.
tex))
(/usr/share/texlive/texmf-dist/tex/generic/pgf/basiclayer/pgfcorelayers.code.te
x)
(/usr/share/texlive/texmf-dist/tex/generic/pgf/basiclayer/pgfcoretransparency.c
ode.tex)
(/usr/share/texlive/texmf-dist/tex/generic/pgf/basiclayer/pgfcorepatterns.code.
tex)
(/usr/share/texlive/texmf-dist/tex/generic/pgf/basiclayer/pgfcorerdf.code.tex))
)
(/usr/share/texlive/texmf-dist/tex/generic/pgf/modules/pgfmoduleshapes.code.tex
) (/usr/share/texlive/texmf-dist/tex/generic/pgf/modules/pgfmoduleplot.code.tex
)
(/usr/share/texlive/texmf-dist/tex/latex/pgf/compatibility/pgfcomp-version-0-65
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(/usr/share/texlive/texmf-dist/tex/latex/pgf/compatibility/pgfcomp-version-1-18
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(/usr/share/texlive/texmf-dist/tex/latex/pgf/utilities/pgfkeys.sty
(/usr/share/texlive/texmf-dist/tex/generic/pgf/utilities/pgfkeys.code.tex))
(/usr/share/texlive/texmf-dist/tex/latex/pgf/math/pgfmath.sty
(/usr/share/texlive/texmf-dist/tex/generic/pgf/math/pgfmath.code.tex))
(/usr/share/texlive/texmf-dist/tex/generic/pgf/utilities/pgffor.code.tex
(/usr/share/texlive/texmf-dist/tex/generic/pgf/math/pgfmath.code.tex)))
(/usr/share/texlive/texmf-dist/tex/generic/pgf/frontendlayer/tikz/tikz.code.tex

(/usr/share/texlive/texmf-dist/tex/generic/pgf/libraries/pgflibraryplothandlers
.code.tex)
(/usr/share/texlive/texmf-dist/tex/generic/pgf/modules/pgfmodulematrix.code.tex
)
(/usr/share/texlive/texmf-dist/tex/generic/pgf/frontendlayer/tikz/libraries/tik
zlibrarytopaths.code.tex)))
(/usr/share/texlive/texmf-dist/tex/latex/tikz-bayesnet/tikzlibrarybayesnet.code
.tex
(/usr/share/texlive/texmf-dist/tex/generic/pgf/frontendlayer/tikz/libraries/tik
zlibraryshapes.code.tex
(/usr/share/texlive/texmf-dist/tex/generic/pgf/frontendlayer/tikz/libraries/tik
zlibraryshapes.geometric.code.tex
(/usr/share/texlive/texmf-dist/tex/generic/pgf/libraries/shapes/pgflibraryshape
s.geometric.code.tex))
(/usr/share/texlive/texmf-dist/tex/generic/pgf/frontendlayer/tikz/libraries/tik
zlibraryshapes.misc.code.tex
(/usr/share/texlive/texmf-dist/tex/generic/pgf/libraries/shapes/pgflibraryshape
s.misc.code.tex))
(/usr/share/texlive/texmf-dist/tex/generic/pgf/frontendlayer/tikz/libraries/tik
zlibraryshapes.symbols.code.tex
(/usr/share/texlive/texmf-dist/tex/generic/pgf/libraries/shapes/pgflibraryshape
s.symbols.code.tex))
(/usr/share/texlive/texmf-dist/tex/generic/pgf/frontendlayer/tikz/libraries/tik
zlibraryshapes.arrows.code.tex
(/usr/share/texlive/texmf-dist/tex/generic/pgf/libraries/shapes/pgflibraryshape
s.arrows.code.tex))
(/usr/share/texlive/texmf-dist/tex/generic/pgf/frontendlayer/tikz/libraries/tik
zlibraryshapes.callouts.code.tex
(/usr/share/texlive/texmf-dist/tex/generic/pgf/libraries/shapes/pgflibraryshape
s.callouts.code.tex))
(/usr/share/texlive/texmf-dist/tex/generic/pgf/frontendlayer/tikz/libraries/tik
zlibraryshapes.multipart.code.tex
(/usr/share/texlive/texmf-dist/tex/generic/pgf/libraries/shapes/pgflibraryshape
s.multipart.code.tex)))
(/usr/share/texlive/texmf-dist/tex/generic/pgf/frontendlayer/tikz/libraries/tik
zlibraryfit.code.tex)
(/usr/share/texlive/texmf-dist/tex/generic/pgf/frontendlayer/tikz/libraries/tik
zlibrarychains.code.tex
(/usr/share/texlive/texmf-dist/tex/generic/pgf/frontendlayer/tikz/libraries/tik
zlibrarypositioning.code.tex))
(/usr/share/texlive/texmf-dist/tex/generic/pgf/frontendlayer/tikz/libraries/tik
zlibraryarrows.code.tex
(/usr/share/texlive/texmf-dist/tex/generic/pgf/libraries/pgflibraryarrows.code.
tex))) (/usr/share/texlive/texmf-dist/tex/latex/l3backend/l3backend-pdftex.def)
 (./example.aux)
(/usr/share/texlive/texmf-dist/tex/context/base/mkii/supp-pdf.mkii
[Loading MPS to PDF converter (version 2006.09.02).]
) (/usr/share/texlive/texmf-dist/tex/latex/epstopdf-pkg/epstopdf-base.sty
(/usr/share/texlive/texmf-dist/tex/latex/latexconfig/epstopdf-sys.cfg))

LaTeX Font Warning: Font shape `OMS/cmtt/m/n' undefined
(Font)              using `OMS/cmsy/m/n' instead
(Font)              for symbol `textbackslash' on input line 38.

Missing character: There is no ; in font nullfont!
Missing character: There is no ; in font nullfont!
Missing character: There is no ; in font nullfont!
Missing character: There is no ; in font nullfont!
Missing character: There is no ; in font nullfont!
Missing character: There is no ; in font nullfont!
Missing character: There is no ; in font nullfont!
Missing character: There is no ; in font nullfont!
Missing character: There is no ; in font nullfont!
Missing character: There is no ; in font nullfont!
Missing character: There is no ; in font nullfont!
Missing character: There is no ; in font nullfont!
Missing character: There is no ; in font nullfont!
Missing character: There is no ; in font nullfont!
Missing character: There is no ; in font nullfont!
Missing character: There is no ; in font nullfont!
Missing character: There is no ; in font nullfont!
Missing character: There is no ; in font nullfont!
Missing character: There is no ; in font nullfont!
Missing character: There is no ; in font nullfont!
Missing character: There is no ; in font nullfont!
(./model_pca.tex
Missing character: There is no ; in font nullfont!
Missing character: There is no ; in font nullfont!
Missing character: There is no ; in font nullfont!
Missing character: There is no ; in font nullfont!
Missing character: There is no ; in font nullfont!
Missing character: There is no ; in font nullfont!
Missing character: There is no ; in font nullfont!
) (./model_pca2.tex
Missing character: There is no ; in font nullfont!
Missing character: There is no ; in font nullfont!
Missing character: There is no ; in font nullfont!
Missing character: There is no ; in font nullfont!
Missing character: There is no ; in font nullfont!
Missing character: There is no ; in font nullfont!
Missing character: There is no ; in font nullfont!
Missing character: There is no ; in font nullfont!
Missing character: There is no ; in font nullfont!
Missing character: There is no ; in font nullfont!
Missing character: There is no ; in font nullfont!
Missing character: There is no ; in font nullfont!
Missing character: There is no ; in font nullfont!
Missing character: There is no ; in font nullfont!
Missing character: There is no ; in font nullfont!
Missing character: There is no ; in font nullfont!
Missing character: There is no ; in font nullfont!
Missing character: There is no ; in font nullfont!
Missing character: There is no ; in font nullfont!
Missing character: There is no ; in font nullfont!
Missing character: There is no ; in font nullfont!
Missing character: There is no ; in font nullfont!
Missing character: There is no ; in font nullfont!
Missing character: There is no ; in font nullfont!
Missing character: There is no ; in font nullfont!
Missing character: There is no ; in font nullfont!
Missing character: There is no ; in font nullfont!
Missing character: There is no ; in font nullfont!
Missing character: There is no ; in font nullfont!
Missing character: There is no ; in font nullfont!
) (./model_lda.tex
Missing character: There is no ; in font nullfont!
Missing character: There is no ; in font nullfont!
Missing character: There is no ; in font nullfont!
Missing character: There is no ; in font nullfont!
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Missing character: There is no ; in font nullfont!
Missing character: There is no ; in font nullfont!
Missing character: There is no ; in font nullfont!
Missing character: There is no ; in font nullfont!
Missing character: There is no ; in font nullfont!
Missing character: There is no ; in font nullfont!
Missing character: There is no ; in font nullfont!
Missing character: There is no ; in font nullfont!
Missing character: There is no ; in font nullfont!
Missing character: There is no ; in font nullfont!
Missing character: There is no ; in font nullfont!
Missing character: There is no ; in font nullfont!
Missing character: There is no ; in font nullfont!
Missing character: There is no ; in font nullfont!
Missing character: There is no ; in font nullfont!
Missing character: There is no ; in font nullfont!
Missing character: There is no ; in font nullfont!
Missing character: There is no ; in font nullfont!
Missing character: There is no ; in font nullfont!
Missing character: There is no ; in font nullfont!
Missing character: There is no ; in font nullfont!
Missing character: There is no ; in font nullfont!
Missing character: There is no ; in font nullfont!
Missing character: There is no ; in font nullfont!
Missing character: There is no ; in font nullfont!
Missing character: There is no ; in font nullfont!
Missing character: There is no ; in font nullfont!
Missing character: There is no ; in font nullfont!
Missing character: There is no ; in font nullfont!
Missing character: There is no ; in font nullfont!
Missing character: There is no ; in font nullfont!
Missing character: There is no ; in font nullfont!
Missing character: There is no ; in font nullfont!
Missing character: There is no ; in font nullfont!
Missing character: There is no ; in font nullfont!
) (./model_citation_influence.tex
Missing character: There is no ; in font nullfont!
Missing character: There is no ; in font nullfont!
Missing character: There is no ; in font nullfont!
Missing character: There is no ; in font nullfont!
Missing character: There is no ; in font nullfont!
Missing character: There is no ; in font nullfont!
Missing character: There is no ; in font nullfont!
Missing character: There is no ; in font nullfont!
Missing character: There is no ; in font nullfont!
Missing character: There is no ; in font nullfont!
Missing character: There is no ; in font nullfont!
Missing character: There is no ; in font nullfont!
Missing character: There is no ; in font nullfont!
Missing character: There is no ; in font nullfont!
Missing character: There is no ; in font nullfont!
Missing character: There is no ; in font nullfont!
Missing character: There is no ; in font nullfont!
Missing character: There is no ; in font nullfont!
Missing character: There is no ; in font nullfont!
Missing character: There is no ; in font nullfont!
Missing character: There is no ; in font nullfont!
Missing character: There is no ; in font nullfont!
Missing character: There is no ; in font nullfont!
Missing character: There is no ; in font nullfont!
Missing character: There is no ; in font nullfont!
Missing character: There is no ; in font nullfont!
Missing character: There is no ; in font nullfont!
Missing character: There is no ; in font nullfont!
Missing character: There is no ; in font nullfont!
Missing character: There is no ; in font nullfont!
Missing character: There is no ; in font nullfont!
Missing character: There is no ; in font nullfont!
Missing character: There is no ; in font nullfont!
Missing character: There is no ; in font nullfont!
Missing character: There is no ; in font nullfont!
Missing character: There is no ; in font nullfont!
Missing character: There is no ; in font nullfont!
Missing character: There is no ; in font nullfont!
Missing character: There is no ; in font nullfont!
Missing character: There is no ; in font nullfont!
Missing character: There is no ; in font nullfont!
Missing character: There is no ; in font nullfont!
Missing character: There is no ; in font nullfont!
Missing character: There is no ; in font nullfont!
Missing character: There is no ; in font nullfont!
Missing character: There is no ; in font nullfont!
Missing character: There is no ; in font nullfont!
Missing character: There is no ; in font nullfont!
Missing character: There is no ; in font nullfont!
Missing character: There is no ; in font nullfont!
Missing character: There is no ; in font nullfont!
Missing character: There is no ; in font nullfont!
Missing character: There is no ; in font nullfont!
Missing character: There is no ; in font nullfont!
Missing character: There is no ; in font nullfont!
Missing character: There is no ; in font nullfont!
Missing character: There is no ; in font nullfont!
Missing character: There is no ; in font nullfont!
Missing character: There is no ; in font nullfont!
Missing character: There is no ; in font nullfont!
Missing character: There is no ; in font nullfont!
Missing character: There is no ; in font nullfont!
Missing character: There is no ; in font nullfont!
Missing character: There is no ; in font nullfont!
Missing character: There is no ; in font nullfont!
Missing character: There is no ; in font nullfont!
Missing character: There is no ; in font nullfont!
Missing character: There is no ; in font nullfont!
Missing character: There is no ; in font nullfont!
Missing character: There is no ; in font nullfont!
Missing character: There is no ; in font nullfont!
Missing character: There is no ; in font nullfont!
Missing character: There is no ; in font nullfont!
Missing character: There is no ; in font nullfont!
Missing character: There is no ; in font nullfont!
Missing character: There is no ; in font nullfont!
Missing character: There is no ; in font nullfont!
Missing character: There is no ; in font nullfont!
Missing character: There is no ; in font nullfont!
Missing character: There is no ; in font nullfont!
Missing character: There is no ; in font nullfont!
Missing character: There is no ; in font nullfont!
Missing character: There is no ; in font nullfont!
Missing character: There is no ; in font nullfont!
Missing character: There is no ; in font nullfont!
Missing character: There is no ; in font nullfont!
Missing character: There is no ; in font nullfont!
Missing character: There is no ; in font nullfont!
Missing character: There is no ; in font nullfont!
Missing character: There is no ; in font nullfont!
Missing character: There is no ; in font nullfont!
Missing character: There is no ; in font nullfont!
Missing character: There is no ; in font nullfont!
Missing character: There is no ; in font nullfont!
Missing character: There is no ; in font nullfont!
Missing character: There is no ; in font nullfont!
Missing character: There is no ; in font nullfont!
Missing character: There is no ; in font nullfont!
Missing character: There is no ; in font nullfont!
Missing character: There is no ; in font nullfont!
Missing character: There is no ; in font nullfont!
Missing character: There is no ; in font nullfont!
Missing character: There is no ; in font nullfont!
Missing character: There is no ; in font nullfont!
Missing character: There is no ; in font nullfont!
Missing character: There is no ; in font nullfont!
Missing character: There is no ; in font nullfont!
Missing character: There is no ; in font nullfont!
Missing character: There is no ; in font nullfont!
Missing character: There is no ; in font nullfont!
Missing character: There is no ; in font nullfont!
Missing character: There is no ; in font nullfont!
Missing character: There is no ; in font nullfont!
Missing character: There is no ; in font nullfont!
Missing character: There is no ; in font nullfont!
Missing character: There is no ; in font nullfont!
Missing character: There is no ; in font nullfont!
Missing character: There is no ; in font nullfont!
Missing character: There is no ; in font nullfont!
Missing character: There is no ; in font nullfont!
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) [1{/var/lib/texmf/fonts/map/pdftex/updmap/pdftex.map}] [2] [3] [4]
(./example.aux)

LaTeX Font Warning: Some font shapes were not available, defaults substituted.

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exmf-dist/fonts/type1/public/amsfonts/cm/cmti10.pfb></usr/share/texlive/texmf-d
ist/fonts/type1/public/amsfonts/cm/cmtt10.pfb>
Output written on example.pdf (4 pages, 192757 bytes).
Transcript written on example.log.

Is it possible to add labels/text to directed edges?

Hi,
is it possible to add labels/text along a directed edge connecting two nodes?
I would assume there is an option to pass such an argument to the edge command, e.g. like
\edge [text="label"] {node1} {node2}
Thanks for the great package.
Best,
Julius

Equal size nodes

For a Bayesian network, is it possible to make all latent and obs nodes the same size in a tikzpicture? Most solutions suggest applying a minimum size to the style of the node, but then the node seems to lose its original properties.

Undirected edges?

Can tikz-bayesnet handle undirected graphs (no arrows on edges), like Markov Random Fields?

Square nodes for observed variables

I'm having some issues with the interpretability of models drawn with bayesnet. This is more a suggestion for improvements, than an error report, but anyway:

Having identical shapes for latent and observed variables, makes distinguishing between them very challenging, and only doing so with different shadings does not help when you have suboptimal print or when people have problems with their eyes.

Is it possible to change the default observed variable shape to a square? Or at least provide an option for it in the package that does not involve making all sorts of customizations? This would also make the library more compatible with how DAGs are usually presented in for example structural equation modelling.

As a bonus, this would then free up shadings to be used in other ways, to communicate emphasis on certain parts of the graph.

Issues aside though, i really like your tikzlibrary. :)

Dashed lines option

Hi,

I understand that this hasn't been updated for a while but wondering if there is a dashed line option for edges? For example to display a markov chain?

Thanks,
p.s. This package has been extremely helpful for my papers/ thesis. Cheers!

edge bend does not work

How to bend the edges? When i add the option [bend right=30], the edge is still straight.

How to add looped edge?

I would like to have an edge that loops from one node to itself to show a temporal dependence. Using \edge {b_t} {b_t} ; does not work. Is there a workaround?

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