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Hi there πŸ‘‹, I am Mohammad Abdo - aka Jimmy, I am originally from Egypt πŸ‡ͺπŸ‡¬

I am a Ph.D., a research scientist, and used to be an instructor.

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My honest friends and superiors agreed that my biggest weekness is software development, so that's what I picked as a part of my career 😎


  • πŸ”­ I’m currently a Modeling and simulation specialist, a machine learning staff scientist at Idaho National Laboratory, and a member of RAVEN development team, working on several projects including -but not limited to- Surrogate Construction, Reduced Order Modeling, sparse sensing, metamodeling of porous materials, scaling interpolation and representativity of mockup experiments to target real-world plants, data-driven discovery of governing physics and system identification, digital twins, Time series analysis, Koopman theory, agile software development, and more.

  • 🌱 I’d love to learn in the near future: MLOps, R, Cafee, mongoDB, MySQL,NoSQL, SCALA, Julia, SAS, SPSS, ApacheSpark, Kafka, Hadoop, Hive, MapReduce, Casandra, Weka.

  • πŸ§‘β€πŸ€β€πŸ§‘ I’m looking to collaborate on Physics-based neural networks.

  • πŸ’¬ Ask me about ROM, uncertainty quantification, sensitivity analysis, active subspaces, probabilistic error bounds, dynamic mode decomposition (DMD).
  • ⚑ Fun fact: I like basketball, volleyball, and soccer.

  • 🏑 website | πŸ‘” linkedin | researchgate |

  • 🐦 [twitter][twitter] | πŸ“Ί [youtube][youtube] | πŸ“· [instagram][instagram] |

Skills:


  • πŸ€–πŸ‘½ Machine Learning: regression, regularization, classification, clustering, collaborative filtering, support vector machines, naive Bayes, decision trees, random forests, anomaly detection, recommender systems, artificial data synthesis, ceiling analysis, Artificial Neural Networks (ANNs), Deep Neural Networks (DNNs), Convolutional Neural Networks (CNNs), Recurrent Neural Networks (RNNs), Long Short Term Memory (LSTMs), Natural Language Processing (NLP), Transformer models, Attention Mechanisms.

  • Reduced Order Modeling: PCA, PPCA, KPCA, isomap, laplacian eigenmaps, LLE, HLLE, LTSA, surrogate modeling, Koopman theory, time-delayed embeddings, dynamic mode decomposition (DMD), dynamical systems and control, data-driven (equation-free) modeling, sparse identification of dynamical systems (Sindy), compressive sensing for full map recovery from sparse measurements, time-series analysis, ARMA, ARIMA.

  • Sensitivity Analysis (SA): Sobol indices, morris screenning, PAWN, moment-independent SA.

  • Uncertainty Quantification (UQ): Forward UQ, adjoint UQ, invers UQ.

  • Optimization: Gradient-Based Optimizers, conjugate gradient, Metaheuristic: Simulated Annealing, Genetic Algorithms.

  • πŸ–₯️ Programming Languages and Packages: Bash scripting, MATLAB, Python: numpy, scipy, matplotlib, plotly, bokeh, seaborn, pandas, Jupyter notebook, ScikitLearn, Keras, Tensorflow.

  • ** High Performance Computing (HPC)**

Languages and Tools:

canvasjs vscode github git python jupyter numpy scipy matplotlib seaborn pandas plotly bokeh altair scikit_learn tensorflow keras pytorch linux matlab



Certificates


  • πŸ•―οΈ Machine Learning - Stanford|Online | Intro to ML. (i) Supervised learning (parametric/non-parametric algorithms, support vector machines, kernels, neural networks). (ii) Unsupervised learning (clustering, dimensionality reduction, recommender systems, deep learning). (iii) Best practices in machine learning (bias/variance delimma)
  • πŸ•―οΈ Neural Networks and Deep Learning - DeepLearning.AI | Build, train, and apply fully connected deep neural networks; implement efficient (vectorized) neural networks; identify key parameters in a neural network’s architecture
  • πŸ•―οΈ Improving Deep Neural Networks: Hyperparameter Tuning, Regularization and Optimization - DeepLearning.AI | L2 and dropout regularization, hyperparameter tuning, batch normalization, and gradient checking; optimization algorithms such as mini-batch gradient descent, Momentum, RMSprop and Adam, implement a neural network in TensorFlow.
  • πŸ•―οΈ Structuring Machine Learning Projects - DeepLearning.AI | Diagnose errors in a machine learning system; prioritize strategies for reducing errors; understand complex ML settings, such as mismatched training/test sets, and comparing to and/or surpassing human-level performance; and apply end-to-end learning, transfer learning, and multi-task learning.
  • πŸ•―οΈ Convolution Neural Networks - DeepLearning.AI | Build a convolutional neural network, including recent variations such as residual networks; apply convolutional networks to visual detection and recognition tasks; and use neural style transfer to generate art and apply these algorithms to a variety of image, video, and other 2D or 3D data.
  • πŸ•―οΈ Sequence Models - DeepLearning.AI | Natural Language Processing, Long Short Term Memory (LSTM), Gated Recurrent Unit (GRU), Recurrent Neural Network, Attention Models
  • πŸ•―οΈ Deep Learning Specialization - DeepLearning.AI |


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Connect with me:

mohammad abdo mohammad abdo researchgate mohammad abdo

jimmy-inl's Projects

dmdbookjupyter icon dmdbookjupyter

Jupyter Notebook Equivalents of the Matlab Code associated with the DMD book (Kutz, Brunton, Brunton, Proctor)

dmdcsp icon dmdcsp

Sparsity-Promoting Dynamic Mode Decomposition with Control

doa-release icon doa-release

A Direction-of-Arrival estimation code repo accompanying our research paper.

docs icon docs

TensorFlow documentation

doepy icon doepy

Design of Experiment Generator. Read the docs at: https://doepy.readthedocs.io/en/latest/

dominant-balance icon dominant-balance

Methods and code for J. L. Callaham, J. N. Kutz, B. W. Brunton, and S. L. Brunton (2020)

dowhy icon dowhy

DoWhy is a Python library for causal inference that supports explicit modeling and testing of causal assumptions. DoWhy is based on a unified language for causal inference, combining causal graphical models and potential outcomes frameworks.

dpd icon dpd

DPD (dissipative particle dynamics) method

dpdsim icon dpdsim

A dissipative particle dynamics (DPD) project.

dragonfly icon dragonfly

An open source python library for scalable Bayesian optimisation.

draw_curved_edges icon draw_curved_edges

A script to plot a network saved as a list of weighted edges in a circular layout with curved link between them using networkx and matplotlib

drnet icon drnet

PyTorch implementation of the NIPS 2017 paper - Unsupervised Learning of Disentangled Representations from Video

dronecrowd icon dronecrowd

Drone-based Joint Density Map Estimation, Localization and Tracking with Space-Time Multi-Scale Attention Network

dronepilot icon dronepilot

Automatic pilot that can control and fly several drones, including Pixhawk's, APM's and MultiWii's

drug_sensitivity_ml icon drug_sensitivity_ml

Machine Learning predictions of cancer cell sensitivity to different drugs using data from CCLE (Cancer Cell Line Encyclopedia).

ds-with-pysimplegui icon ds-with-pysimplegui

Data science and Machine Learning GUI programs/ desktop apps with PySimpleGUI package

dsatools icon dsatools

Digital signal analysis library for python. The library includes such methods of the signal analysis, signal processing and signal parameter estimation as ARMA-based techniques; subspace-based techniques; matrix-pencil-based methods; singular-spectrum analysis (SSA); dynamic-mode decomposition (DMD); empirical mode decomposition; variational mode decomposition (EMD); empirical wavelet transform (EWT); Hilbert vibration decomposition (HVD) and many others.

dtdl-validator icon dtdl-validator

A code sample that uses the DTDL parser library to validate DTDL model code for data description in IoT.

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