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ISA tools's Projects

2isadoc icon 2isadoc

Documentation for various xml2isa converters

automacron icon automacron

Motif finding algorithm and tool to find functionally relevant motifs in workflows.

bio-parser-isatab icon bio-parser-isatab

Parses ISA-Tab investigation file and dependent files into one big hash-based Perl data structure

bioinvindex icon bioinvindex

The web application, model, database persistence, services package and web services for the BII. Led by Eamonn Maguire (Uni. of Oxford) & Philippe Rocca-Serra (Uni. of Oxford).

biopy-isatab icon biopy-isatab

Python parser for ISAtab, a biological file format for experimental metadata

biosharingutils icon biosharingutils

A selection of tools to automatically update content in BioSharing.

container-mw2isa icon container-mw2isa

a repo for a docker container for a microservice converting an MWTab to ISA-Tab format

copo icon copo

Collaborative Open Plant Omics

doi_site icon doi_site

A simple Django app to wrap datacite calls.

galaxy icon galaxy

Data intensive science for everyone.

graph2tab icon graph2tab

graph2tab, a library to convert experimental workflow graphs into tabular formats

helpwebutility icon helpwebutility

The web browser in this package has pretty basic functionalities, but is also quite flexible, and for in-app browsing, like that done in IntelliJ for instance, in order to navigate to help pages, it is perfect. I don't need any special JNI calls to invoke browsers therefore I don't introduce platform-dependent code into the codebase.

isa-configurations icon isa-configurations

ISAconfiguration files which have been created by the ISAconfigurator. These can be used by ISAcreator, ISAvalidator, ISAconverter and the BII Data Management Tool

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