Code Monkey home page Code Monkey logo

matamosca's Introduction

Hi there! 👋

I am a PhD student, using bioinformatics to "Uncover the role of conductive nanomaterials in anaerobic digestion".

Tools for meta-omics analyses

My work has mostly been the development of tools for analyses of meta-omics data, i.e., the study of the collective genomes, transcriptomes or proteomes of a microbial community.

These are the main tools I have developed for meta-omics analyses:

UPIMAPI, reCOGnizer and KEGGCharter

UPIMAPI, reCOGnizer and KEGGCharter are tools developed for the analyses of omics data, and optimized for handling the challenges of meta-omics.

MOSCA

MOSCA is a powerful pipeline developed for metagenomics (MG), metatranscriptomics (MT) and metaproteomics (MP) integrated analyses.

Finally, some metrics about my coding routine:

Code Time

I'm an Early 🐤

🌞 Morning                1796 commits        █████████░░░░░░░░░░░░░░░░   37.55 % 
🌆 Daytime                2067 commits        ███████████░░░░░░░░░░░░░░   43.22 % 
🌃 Evening                756 commits         ████░░░░░░░░░░░░░░░░░░░░░   15.81 % 
🌙 Night                  164 commits         █░░░░░░░░░░░░░░░░░░░░░░░░   03.43 %

📅 I'm Most Productive on Wednesday

Monday                   852 commits         ████░░░░░░░░░░░░░░░░░░░░░   17.81 % 
Tuesday                  862 commits         █████░░░░░░░░░░░░░░░░░░░░   18.02 % 
Wednesday                1436 commits        ████████░░░░░░░░░░░░░░░░░   30.02 % 
Thursday                 689 commits         ████░░░░░░░░░░░░░░░░░░░░░   14.41 % 
Friday                   514 commits         ███░░░░░░░░░░░░░░░░░░░░░░   10.75 % 
Saturday                 38 commits          ░░░░░░░░░░░░░░░░░░░░░░░░░   00.79 % 
Sunday                   392 commits         ██░░░░░░░░░░░░░░░░░░░░░░░   08.20 %

📊 This Week I Spent My Time On

💬 Programming Languages: 
Python                   1 hr 37 mins        █████████████████████░░░░   82.27 % 
Markdown                 12 mins             ███░░░░░░░░░░░░░░░░░░░░░░   10.65 % 
Docker                   3 mins              █░░░░░░░░░░░░░░░░░░░░░░░░   02.80 % 
GitIgnore file           2 mins              ░░░░░░░░░░░░░░░░░░░░░░░░░   01.73 % 
YAML                     1 min               ░░░░░░░░░░░░░░░░░░░░░░░░░   01.25 % 

🐱‍💻 Projects: 
s2m2                     1 hr 27 mins        ██████████████████░░░░░░░   73.44 % 
UPIMAPI                  19 mins             ████░░░░░░░░░░░░░░░░░░░░░   16.15 % 
reCOGnizer               8 mins              ██░░░░░░░░░░░░░░░░░░░░░░░   07.01 % 
mars-terraformers        2 mins              ░░░░░░░░░░░░░░░░░░░░░░░░░   01.76 % 
KEGGCharter              1 min               ░░░░░░░░░░░░░░░░░░░░░░░░░   01.14 %

I Mostly Code in Python

Python                   11 repos            ███████████░░░░░░░░░░░░░░   44.00 % 
HTML                     7 repos             ███████░░░░░░░░░░░░░░░░░░   28.00 % 
Jupyter Notebook         2 repos             ██░░░░░░░░░░░░░░░░░░░░░░░   08.00 % 
JavaScript               1 repo              █░░░░░░░░░░░░░░░░░░░░░░░░   04.00 % 
CSS                      1 repo              █░░░░░░░░░░░░░░░░░░░░░░░░   04.00 %

Last Updated on 15/07/2024 18:49:58 UTC

matamosca's People

Contributors

iquasere avatar vmspereira avatar

Watchers

avatar avatar

Recommend Projects

  • React photo React

    A declarative, efficient, and flexible JavaScript library for building user interfaces.

  • Vue.js photo Vue.js

    🖖 Vue.js is a progressive, incrementally-adoptable JavaScript framework for building UI on the web.

  • Typescript photo Typescript

    TypeScript is a superset of JavaScript that compiles to clean JavaScript output.

  • TensorFlow photo TensorFlow

    An Open Source Machine Learning Framework for Everyone

  • Django photo Django

    The Web framework for perfectionists with deadlines.

  • D3 photo D3

    Bring data to life with SVG, Canvas and HTML. 📊📈🎉

Recommend Topics

  • javascript

    JavaScript (JS) is a lightweight interpreted programming language with first-class functions.

  • web

    Some thing interesting about web. New door for the world.

  • server

    A server is a program made to process requests and deliver data to clients.

  • Machine learning

    Machine learning is a way of modeling and interpreting data that allows a piece of software to respond intelligently.

  • Game

    Some thing interesting about game, make everyone happy.

Recommend Org

  • Facebook photo Facebook

    We are working to build community through open source technology. NB: members must have two-factor auth.

  • Microsoft photo Microsoft

    Open source projects and samples from Microsoft.

  • Google photo Google

    Google ❤️ Open Source for everyone.

  • D3 photo D3

    Data-Driven Documents codes.