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hcp-pipelines-singularity's Introduction

Singularity Definitions for HCP Pipelines

The definition files for creating singularity containers for the XNAT pipelines wrapper code so that it can run in the WashU HPC.

Cloning with Submodules

Don't forget to pull down the submodules as well, with the --recursive flag.

git clone https://github.com/humanconnectome/hcp-pipelines-singularity --recursive

Development

Command Task
make clean Remove previous container image.
make update Update all the git submodule repos.
make build Generate a container image from .def file
make upload Upload the container to correct location in the HPC.

hcp-pipelines-singularity's People

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