Professor Bart. W. Hoogenboom

• Luke K. Davis (@patherlkd)
• Lorenzo Braccini
• Livia Maskos
• Adrien Claret-Tournier

1. Click on the Launch Binder button at the top of this README.

2. Wait for the remote server to build the repo (can take a few moments), which will start a new window with the remote jupyter notebook directory.

3. Click on a jupyter notebook of your choice.

4. Click Cell and then Run All (Unless other running instructions specified).

Notes: Different cells take time to run, if on the left side of the notebook you see In[] (empty) it has not run yet. If you see In[*] it is currently running. If you see In[<number>] it has been executed (number relates to the order of its execution e.g. = 1st to tun).

• Either clone/fork this repository.

• Download individual coding files.

Please contact the lead/ raise an issue on the repository.

• To clone current version onto you local machine:

<terminal>$ git clone https://github.com/hoogenboom-lab/teaching.git

• To update your local copy with updated remote changes:

<terminal>$ git pull origin master

• To remove a file (please take care when doing this):

<terminal>$ rm <file>
<terminal>$ git add .
<terminal>$ git commit -m "Removed <file>"
<terminal>$ git push origin master

• To add or change a file:

<terminal>$ jupyter notebook

Then add or change your code to the notebook and save to a sensible filename = <file>. If you are updating an existing notebook, save it to the same filename.

<terminal>$ git add <file>
<terminal>$ git commit -m "Added <file>".
<terminal>$ git push origin master

You can also upload files on the github page itself ( Add file).

• If you encounter merge issues, please contact Luke Davis (via Slack/email/github).