hmontenegro Goto Github PK
Type: User
hmontenegro's Projects
bioconda-recipes
Conda recipes for the bioconda channel.
biostar-recipes
Tools, Pipelines for the Biostar Engine
diamond
Accelerated BLAST compatible local sequence aligner.
edda
Source for course materials at http://ged.msu.edu/angus/
exonerate
A generic tool for sequence alignment
exonerate-gff3
exonerate fork with added gff3 support
famsa
Algorithm for large-scale multiple sequence alignments (400k proteins in 2 hours and 8BG of RAM)
leafcutter
Annotation-free quantification of RNA splicing. Yang I. Li, David A. Knowles, Jack Humphrey, Alvaro N. Barbeira, Scott P. Dickinson, Hae Kyung Im, Jonathan K. Pritchard
perl-virtualenv
Virtual Environment for Perl
phyloflash
phyloFlash - A pipeline to rapidly reconstruct the SSU rRNAs and explore phylogenetic composition of an illumina (meta)genomic dataset.
placenta
reproduce the Bushman placenta paper
trinotater
Trinotate annotation report summaries in R
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